Allomeiothermus silvanus: Mesil_0722
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Entry
Mesil_0722 CDS
T01246
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
msv
Allomeiothermus silvanus
Pathway
msv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mesil_0722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msv03019
]
Mesil_0722
03009 Ribosome biogenesis [BR:
msv03009
]
Mesil_0722
Enzymes [BR:
msv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mesil_0722
Messenger RNA biogenesis [BR:
msv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mesil_0722
Ribosome biogenesis [BR:
msv03009
]
Prokaryotic type
rRNA helicases
Mesil_0722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Hera_RBD
Hera_DD
GUCT
ERCC3_RAD25_C
DbpA
Motif
Other DBs
NCBI-ProteinID:
ADH62637
UniProt:
D7BB77
LinkDB
All DBs
Position
712878..714494
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AA seq
538 aa
AA seq
DB search
MEFKDFALRPEVLAALEAKGFTTPTAIQAQAIPLALEGRDVLGQARTGTGKTLAFALPIA
HKLEAPFRGDSRVASRQRGRPPRAFILTPTRELALQVAGELAWVAPHLHVLPIYGGTGYG
SQAEGLRRGADVVVATPGRAIDYLNQGILDLSHVEIAVLDEADEMLSMGFEEDVEKLLGA
TPASRQTFLFSATVPSWAKRLAERYMRDPVHVNVVKDEQVSYEELALQAPLQTRLNTLTD
VIFAYAPERTIVFTRTKAEVDELATGLQARGIGAAPIHGDMSQRERERVLGRFREGTDTV
LVATDVAARGLDIPEVDLVVHFRLPEKAEPYQHRSGRTGRAGRSGRVILFYGPRERRELE
NLEYAVKRRFKRVNPPTPEEVQEAKWQRLLARLAKQPPHERAPWRELADRLVNDREAIAG
LLAFMLGTVSAPKSLITGEEGLVTVKLSGQRLTIARVVAVLKKAGAGRIGRIVLSQDAAY
IDVQADELESIQQNLSEFHLSRAHEVPAESPSRERRESEGRTPRRERSYSERRRVVSR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaagattttgctttgcggcccgaggtgctggctgccctcgaggccaagggt
ttcacaacccccaccgccatccaagcgcaggccattcccctagccctggagggtagggac
gtgttaggccaggcccgtaccggcaccggaaagaccctggccttcgctttgcctattgcg
cataagctcgaggcgccgtttcgcggcgatagccgggtggcttctcgccaacggggccgt
cccccgcgggcttttattctcacccctacccgcgaattggccctgcaggtcgcgggtgag
ctagcttgggtggcgccgcacttgcacgtgttgcccatttatggcggcactgggtacggt
tctcaggccgaggggctgcggcgcggcgcggatgtggtggtcgccaccccgggtcgggcc
atcgactatctgaatcagggcatcctggatctttctcatgtcgagatcgctgtgctcgac
gaggctgacgagatgctctcgatgggcttcgaggaagatgtagaaaaactgctgggcgcg
accccggcttcacgccagactttcctcttctcggccaccgtgccaagctgggccaagcgc
ctggccgaacgttacatgcgggatcccgtccatgtcaacgtggtcaaggacgagcaggtg
agctacgaggaactggccctacaagcccccctgcagactcgtttgaacaccctaaccgac
gtgatctttgcctatgcccctgagcgtaccatcgtctttactcgtaccaaggctgaggtg
gatgagctggccacgggcttgcaagcccgtggcattggggcagcgcccattcacggcgac
atgagccagcgcgagcgcgagcgggtgctgggccgtttccgcgaaggtaccgataccgta
ctggtcgccaccgacgtggccgccaggggcctggacatccccgaggtggacctggtggtg
cattttcggcttcctgagaaggccgagccttaccagcaccgctcagggcgtactggccgg
gcagggcggagtggccgggtcatcctgttctacgggccgcgcgagcgccgtgagctggag
aacctcgagtatgccgtcaaacgccgcttcaaacgggtcaatccgcccacccctgaggag
gtacaggaggccaagtggcagaggttgctggcccgtctcgccaagcaacccccccatgag
cgcgccccctggcgcgagctggcagatcggttggtgaatgaccgcgaggccattgccggg
ctcttggcgttcatgctgggcaccgtttcggcccctaagagcctcatcaccggcgaggaa
ggcttggtcacggtgaagctcagcgggcagcgccttaccattgcgcgggtggtggcggtg
cttaagaaagctggggcgggccggatcgggcggatcgtgctctcccaggacgccgcttat
atcgacgtgcaggccgacgaactcgaatccatccagcaaaacttgagcgagttccacctc
tcccgtgcccacgaggtcccggcggaaagcccctcgcgcgagcgccgcgagagcgaaggc
cggactccccggcgggagcgttcctactcggagcgtcgccgggtagtctcccgctaa
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