Allomeiothermus silvanus: Mesil_0822
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Entry
Mesil_0822 CDS
T01246
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
msv
Allomeiothermus silvanus
Pathway
msv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mesil_0822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msv03021
]
Mesil_0822
03400 DNA repair and recombination proteins [BR:
msv03400
]
Mesil_0822
Enzymes [BR:
msv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mesil_0822
Transcription machinery [BR:
msv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mesil_0822
DNA repair and recombination proteins [BR:
msv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mesil_0822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RPOC_hybrid
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ADH62735
UniProt:
D7BBT9
LinkDB
All DBs
Position
813998..818581
Genome browser
AA seq
1527 aa
AA seq
DB search
MKREVRKVRIALAAPEKIRQWSYGEVEKPETINYRTLRPERDGLFDERIFGPIKDYECSC
GKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHVELATPVAHIWYVKDVPSKIGTLLDLSA
QELEQVLYFAKYITIDPKGAMLAGQPVAKRQLLTDEEYRELRFGKQETYSIPLGVDALIK
DGEEVKRGQELAPGVQSKMDGLAFFRFPRRIRVEYIQRERAHLSLPREAWIEQKSYRAGE
PLAELSEKHQIKSEDSGAVQIVEFEEGALLKIVDPDTGTVSVVYFLPVGFKAKVGEGELV
SKGEVIAEGKGLIRMPRTVRVSEVEASGKKEVELSLTLEWSEAKDYPLQPHMHVLVSEGM
KVRKGEKLVGAIEPEEEVYAEADGIVHLHEPASIVVMKAKLYPFEDDVEVTNGDRVSPGD
SLADGGKVKSEIYGRVEVDLVRMAVRVIESYDIDARMGAEAIQALLKDLDLAVLEAELEA
EMKHPSRAKRAKARKRLEVTRAFRDSGNRPEWMVLEAVPVLPPDLRPMVQVDGGRFATSD
LNDLYRRLINRNNRLKKLLAQGAPEMIIRNEKRMLQEAVDALLDNGRRGTPVTNPGSDRA
LRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLK
RMEEKGIANNIKSARKMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPV
LVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSYAQAEARIQMLSSHNLLSPASGDPVA
KPARDVILGLYYITQLRREKKGAGREFKTLEEADAAYARGEIALNAPIKIAGKETSLGRM
KFVFASVDEALLAVQNGIVDHQDVVTVRMGDKLLQTSPGRMLFLRIVAEAVEDPEAAQQL
VNLEVAQEKNSLSDLVYRSFLLLGIEKTAKLLDALKYYGFVLSTQSGITIGIDDAVIPPE
KRQYLEEADAKLAQIEAAFEMGFMTQEERVAQIVQLWSETTERVTQAVFKNFEENFPFNP
LYVMSQSKARGNPQQIRQISGMRGLMAKPSGETIEVPVRASFREGLTVLEYFISTHGARK
GGADTALRTADSGYLTRKLHDVAHEVIVREADCGTTDYITIPLLQFDEAFRNKRLRKRSD
IESGLYGRTVARDFEVNGKTFKEGTQLSLDDVGHIVKAAEANLIEEVAVRSPLVCRTRFG
VCQQCYGWDLSMVKLVNIGETVGVVAAESIGEPGTQLTMRTFHTGGVATGTDITQGLPRV
IELFEARRPKVKAIIAEIDGTVRIEESEDKVSIFVISEGFQKEYKVPKEARITVKDGDVV
EAGQPLTRGAIDPHQLLEAKGPEAVERYLVDEIQRVYRAQGVKLHDKHIEVIVRQMLKYV
EIGDPGDSRFLEGQILEKWDVEAANEKLSREGKMPASWKPVLMGVTKSALSTKSWLSAAS
FQHTTHVLTEAAIAGKKDELIGLKENVILGKLIPAGTGSDHVRDTQVVDERTLRKIEEAR
KEADQAPAVHRDQRRIPLTRQQTGRDV
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagaagtcagaaaagtacgcatcgccctggctgcaccggagaagattcgccag
tggagctacggcgaggttgaaaagcccgagaccatcaactaccgcaccctgcgcccggag
cgcgacggcctctttgacgagcgcattttcggtcccatcaaggactacgagtgctcttgc
ggtaagtacaagcgccagcgcttcgagggcaaagtctgtgagcgctgtggggtggaggtc
accaaatccatcgtgcgccgctaccgcatgggccacgtcgagctggctaccccggtagcg
cacatctggtatgtcaaggacgtgccctccaagattggcaccctcctggatctcagcgcc
caggaactcgagcaggtcctctacttcgccaagtacatcaccatcgatcccaaaggggcc
atgctggccgggcagccggttgcgaagcgccaactcctcaccgacgaagagtaccgcgaa
ctgcgctttggcaagcaggagacctactccatcccgctgggcgtagacgccctcatcaag
gacggggaggaggtcaagcgcgggcaggagctagctcctggggttcagagcaagatggac
gggttggccttcttccgcttcccccggcgcatccgggtggaatacattcagcgcgagcgg
gcccacctgagcttgccccgcgaggcctggatcgagcagaaaagctaccgcgctggcgaa
ccgctggctgagctatccgaaaaacaccagatcaagagcgaggactccggtgcggtgcag
atcgtcgagtttgaagagggtgctcttctcaagatcgtagaccccgacaccggcacggtc
tcggtggtgtacttcctgccggtgggcttcaaggctaaggtgggggagggcgaactggtt
tccaagggagaggtcatcgccgagggtaagggcctgatccgcatgcccaggacggtgcgg
gtctccgaggttgaggcctccggtaagaaggaagtcgagctttccctgaccctcgagtgg
agcgaggccaaggactatcccctccagccccacatgcacgtgctggtttcggaagggatg
aaagtccgtaagggcgagaagctggtaggggccatcgaacccgaggaagaggtctacgcc
gaggcggacggcatcgtacacctgcacgagcccgcctccatcgtagtcatgaaggccaag
ctctaccccttcgaggatgatgtggaggtgaccaacggcgatcgggtttcccccggggac
agcctggcggatggtgggaaagtcaaaagcgagatctacggtcgggtcgaggtagacctg
gtgcgcatggctgtgcgggtcatcgagagctacgatatcgacgcccgcatgggggcagag
gccattcaagcattgctgaaggatttggacctggcggtgctcgaggccgaactcgaggcg
gagatgaagcaccctagccgggccaagcgggccaaggcgaggaagcgcctggaggtcacc
cgtgctttccgtgactcgggcaaccgcccggagtggatggtgctcgaggcggtgccggtg
ttgcctccggatctgcgccccatggtgcaagtagacggcggccgtttcgcgacgagtgac
ctcaacgatctctaccgccgcctcatcaaccgtaacaaccgccttaaaaagctcctggcc
cagggggccccggagatgatcatccgcaacgaaaagcggatgctccaggaagccgtagac
gcccttttggacaacgggcggcgcggcactccggtcactaaccctggctctgaccgcgcc
ttgcgctcgctgaccgatatcctctccggcaagcagggccgtttccgccagaacctattg
ggcaagcgggtagactactcgggccgtagcgtgatcgtagtagggccgcagctcaagctg
caccagtgcggtctgcccaagcggatggccctcgagctgttcaaacccttcttgctcaaa
cggatggaggagaagggcattgccaacaacatcaagtcggcccgcaagatgctcgagcgc
cagcgcgacatcaaagacgaggtctgggacgctttggaggaggtcatccacggcaaggtg
gtgctcttgaaccgtgctcccaccctgcaccgcctgggcatccaggccttccagccggtg
ctggtagaggggcagagcatccagctccatcccctggtctgcgaggccttcaacgctgac
ttcgacggcgaccagatggccgtgcacgtgccgctatcgagctatgcccaagccgaggcc
cgcatccagatgctctcgtcccacaacttgctcagcccagcctccggtgacccggtggcc
aagcccgcccgtgacgtgattctgggcctgtactacatcacccagcttcgacgtgagaag
aagggagcgggaagagagttcaagaccctcgaggaagccgacgccgcctatgcacggggg
gagattgccctcaacgcccccattaagatcgccggaaaagagaccagtctgggccgcatg
aagtttgtcttcgcttcggtagacgaggccttgctggcggtgcagaacggcatcgtagac
caccaggatgtggtgacggtgcggatgggtgacaagctgctgcagaccagccccgggcgg
atgctcttcctgcgcatcgtggccgaggccgtggaagatcccgaagcggcccagcaactc
gtcaacctcgaggtggcccaggagaagaactcgctctcggatttggtgtaccgcagcttc
ttgctcttgggcatagagaagactgccaagctcctggacgccctgaagtattacggcttc
gtgctctccacccagtcgggtatcaccatcggcatcgacgacgcagtgatcccgccggag
aagcgccagtacctcgaggaagccgacgccaagttggcccagatcgaggcggccttcgag
atgggcttcatgacccaagaagagcgggtcgcccagattgtgcagctttggtcggagacc
accgagcgggtcacccaggcggtgttcaagaacttcgaggagaacttccccttcaacccg
ctgtacgtgatgagccagtccaaggcccgcggtaacccccagcagatccgccagatctcg
gggatgcgcggcctgatggccaagccctccggcgagaccatcgaggttccggtgcgggcc
agcttccgcgaaggtcttacggtgctcgagtacttcatctccacccacggggcgcgtaag
ggtggggccgataccgctttgcgcaccgccgactccggctacctcacccgcaagctgcac
gacgtggctcacgaggtcatcgtgcgcgaggccgactgcggcaccaccgattacatcacc
attcccctgctgcagtttgacgaggctttccgcaacaagcgcttgcgtaagcgctccgat
atcgaatcggggctttatggccgtactgtggcccgcgacttcgaggtgaacggcaagacc
ttcaaggaaggtacccaactctccctcgacgatgtaggccatatcgtcaaagctgccgag
gccaacctcatcgaggaagtggcggtgcgctcgcccttggtgtgccgcacccgcttcggg
gtctgccagcaatgctatggttgggacctctccatggtcaagctggtcaatatcggtgag
acggtaggcgtggtagccgccgagtccatcggcgagccgggtacccagctcaccatgcgt
accttccacaccggtggcgtggctaccggcaccgacatcacccaaggtctgccccgcgtc
atcgagctcttcgaggcccggcgccccaaggtcaaggccatcatcgccgagatcgatggt
acggtgcggattgaggagagcgaggacaaggtgagcatcttcgtgatctccgagggcttc
cagaaggagtacaaggttcccaaggaggcccgtatcacggtcaaggatggggatgtggtg
gaagccggtcagcccctcacccgcggggcgatagacccccaccaactcctcgaggctaaa
ggccctgaggccgtcgagcgctacttggtagacgagatccagcgggtctaccgcgcccag
ggcgtaaagctccacgacaagcacatcgaagtcatcgtgcggcagatgctcaagtacgtg
gaaatcggtgaccccggcgatagccgtttcctggaagggcagatcctggagaagtgggat
gtcgaggcggctaacgaaaagctctctcgagagggtaagatgcctgcttcctggaagccg
gtgctgatgggggttaccaagtccgccctctccaccaagagctggctcagcgcggcttct
ttccagcacactacccacgtgcttaccgaagccgccatcgctgggaagaaagacgagctc
atcggccttaaggagaacgtcatcctaggcaagctgatccccgccgggaccggctccgac
catgtacgcgacacccaggtggtggatgagcgtaccctacgcaagatcgaggaggcccgc
aaggaggctgaccaggccccggcagttcaccgcgatcaacgccgtatcccactcacccgc
cagcagaccgggagggacgtatag
DBGET
integrated database retrieval system
