Allomeiothermus silvanus: Mesil_0842
Help
Entry
Mesil_0842 CDS
T01246
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msv
Allomeiothermus silvanus
Pathway
msv03030
DNA replication
msv03430
Mismatch repair
msv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mesil_0842
03430 Mismatch repair
Mesil_0842
03440 Homologous recombination
Mesil_0842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msv03032
]
Mesil_0842
03400 DNA repair and recombination proteins [BR:
msv03400
]
Mesil_0842
Enzymes [BR:
msv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mesil_0842
DNA replication proteins [BR:
msv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mesil_0842
DNA repair and recombination proteins [BR:
msv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mesil_0842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADH62755
UniProt:
D7BBV9
LinkDB
All DBs
Position
835427..839215
Genome browser
AA seq
1262 aa
AA seq
DB search
MPPVLAYAIARMLHDPANPTHRDDCPSCQFAHLHQHTQFSLLDGAARLKDLIKWVKQVSP
EEPMLAMTDHGNLFGAVQFYKYATEAEVKPIIGYEAYVAAESRFDRKQGKGLDGGYFHLT
LLAKDFEGYQNLCRLASRAYLEGFYGKPRIDREILREHNAGIIALSGCLGAEIPQFILQE
RHEDAERRLLEYLSIFGDKRYFIEVQDHGLPEQKKVNRVLKEFADKYGLGIVATNDGHYV
RKEDAEAHAVVLAVQSKATWDDPNRWKFPCDEFYVKTPQEMRSTLEGERELWGKRFDELF
DNSLEIGRMCNVELVPKKVQYRIPKYPLPEGRTEVTYLRELTFSGLLKRYPDRVTDDLYR
EFLRRLGRPVPHGDGEVLAKALAELEDLEATRAYLPELKEGTPWGPWEILSRAVYELAVV
ERMGFPGYLLIVQDFINWAKSQGISVGPGRGSAAGSLVAYATRITNIDPLAYDLLFERFL
NPARVSMPDIDTDFSDARRGEVIEYVRSRYGDEMVAQIGTFGTLASKAAIKDAARVFGLP
VKKADELAKLIPVVFGKPTPLEKAIETIPDLRAEMEKDPLVARVMEVAKKLEGLNRQSSV
HAAGVVISDVPLQDYIPLMRAGDGEGKVTQYDMGSVEALGFLKMDFLGLRTLSFLDECKR
IVKESKGVDIDYDAIPIDDEKTFELLGRGETKGIFQLDSAGMTSTVRGLKPRRIQDIIAL
GALYRPGPMENIPTYIRRHHGREAVAYPQFPNAAKYLEPILRETYGIPVYQEQIMQIASA
AAGYSLGEADLLRRAMGKKKMEEMVKHRAQFKKGAAQRGIPEDEADRLFDLLEAFANYGF
NKSHSAAYAILTYQTAYVKAHYPVEFHAALLTVERHDSDKVAEYIRAARAMGVEVLPPDI
NRSSFSFSAVGQNVLFGLSAVKNVGEAPTEAIIRERERGGRFKSLPDFLKRVDSAVANKR
VAESLIKAGAFDELGERGQMLAALDDLLKWAQAERESANSGMMGLFADAQSEPTLPKVPP
LDEITRLRYEKEALGIYVTGHPLQRYEGLREAASCTIEDLPDYFHSQKNGKSRIRVLLAG
LVEGIVRKPTKSGGMMCKFMLGDETGAVEVVAFGRSYDKVSPRVREDAPVLLVAEVEPDG
EGETLRVVAQDVYPYNELEGLPKVMELELDLALLDDEKINELGSLFDEYTGLVPVHLKIQ
GSDCWALIEVRPRVDENAKDALAGLDWVRAKLIPDRDALLAVAAAPARGQNGGDPQGPVV
PF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgcccccggttctggcttatgctatagccagaatgttgcacgacccagccaaccccacc
caccgcgacgattgcccttcctgccaattcgcccacttgcaccagcacacccagttctcg
cttctggacggcgcggcccgcctcaaggacctcatcaagtgggtcaagcaggtaagccct
gaggagcccatgctggctatgaccgaccacggcaacctgttcggggccgtgcagttttac
aagtacgccaccgaggccgaggtcaagcccatcatcggctacgaggcctatgtggctgcc
gagagtcgcttcgaccgcaagcaggggaaagggctcgacgggggctacttccacctcaca
ttgctggccaaggacttcgagggctaccagaacctctgccgcctggccagccgggcttac
ctcgagggcttctacggtaaaccccgcatcgaccgggaaatcctgcgcgagcataacgcg
ggcatcatcgcgctttcgggctgcttgggggcggagatcccgcagttcatcctgcaagag
cgccacgaggatgccgagcggcgcctgctggagtacctctcgatctttggggataagcgc
tatttcatcgaggttcaagaccacggcctccccgagcagaagaaggtcaaccgggtgctt
aaggagttcgccgacaaatacggtctgggcatcgtagctaccaacgacgggcactacgtg
cgcaaagaggacgccgaggctcatgcggtggtgctggcggtgcagtcgaaggctacctgg
gacgatcctaaccgctggaagttcccctgcgacgagttctacgtcaaaaccccccaggag
atgcgctctaccctcgagggcgaacgcgagctatggggtaagcgcttcgatgagctgttc
gataactcgctcgagatcgggcgcatgtgcaacgtcgagctggtacccaagaaggtgcag
taccgcatccccaagtaccccctacccgaggggcgcaccgaggtgacctacctccgcgag
ctcaccttcagtggcctcctcaagcgctaccccgacagggtcaccgacgacctctaccgc
gagttcctgcgcaggctgggccggccggtgccccatggtgacggggaggtgttggccaaa
gccctggccgaactcgaggacctcgaggccacccgcgcctacctgcccgaactcaaggag
ggcaccccgtgggggccttgggagatcctctcccgcgccgtctacgagctcgccgtggtc
gagcgcatgggcttccccggttatttacttatcgtgcaggactttatcaactgggccaag
agccagggcatcagcgtagggccgggacgtggctcggcggcagggagcttggtggcgtac
gccacccgcatcaccaacatcgacccgctagcctatgacctgctcttcgagcgcttcttg
aacccggcccgagtctccatgcccgacatcgacaccgacttctccgatgcgcgccgcggt
gaggtcatcgagtacgtgcggtctcgctacggcgatgagatggtggcgcagatcggaacg
ttcggaaccttggcctccaaggccgccatcaaggacgcggcacgggtcttcgggttgccg
gtgaagaaggctgacgagttggccaagcttattccggtggtgttcggcaagcccacgccc
ttagagaaggccatcgagaccatccccgacctcagggcggagatggagaaagaccccctg
gtagcgcgggtgatggaggtggcgaagaagctcgagggcttgaaccgccagtccagtgtg
cacgcggcgggggtagtgatctcggatgtgccgcttcaggactatatccccctgatgcgg
gcgggcgatggcgagggcaaggtcacccagtacgacatgggctcggtggaggccttggga
ttcctcaagatggactttttgggcctgcgcacgctctctttcctcgacgagtgcaagcgc
atcgtgaaggaatccaagggcgtagacatcgactatgacgctattcccatcgacgatgag
aagacctttgagctgttggggcgtggcgagaccaagggcatctttcagctcgactcggcc
ggcatgacctccaccgtgcgcgggctcaagccgcggcgcatccaggacatcattgcgttg
ggggctttgtatcgccccggcccgatggaaaacatccccacctacatccgccgccaccat
gggcgggaggcggtggcctacccgcagttccccaacgcggccaagtacctcgagcccatc
ctgcgcgagacctacgggatcccggtctaccaggagcagatcatgcagatcgcctcggcg
gctgccgggtacagcctaggcgaggccgatttgctgcggagggcgatgggcaagaagaag
atggaggagatggtcaagcaccgcgcccagttcaagaagggtgcggcacagcggggcatt
cccgaggacgaagccgaccggctcttcgacctgctcgaggccttcgccaactacggcttc
aataagtcgcactcggcagcttacgcgatccttacctaccagaccgcctacgtcaaagcc
cactacccggtggagttccatgcggccttgctcaccgtcgagcgccacgactcggacaag
gtggccgagtatatccgggccgcgcgagcgatgggggtggaggtgctgccgccggacatc
aaccgctcctccttcagcttcagcgcggtcggccagaacgtgctgttcgggctttcggcg
gtaaagaacgtaggggaagcgcctaccgaggccatcattcgcgaacgcgagcggggagga
cgcttcaaatccctgccggactttctcaagcgggtagactccgccgtcgccaacaaacgg
gtggcggagtcgttgatcaaagccggggcttttgacgaattgggcgagcgtgggcagatg
ctcgccgccctcgacgacctgctcaagtgggcccaggccgagcgcgagagcgccaactcg
ggcatgatgggcctctttgctgatgctcaaagcgagcccactttgcccaaagtgcccccc
ctggatgagatcacccggcttcgctacgagaaggaggccctaggcatctacgtcaccggc
cacccgcttcagcgctacgaggggctgcgcgaggccgccagctgcactattgaggacctc
cccgactacttccacagccagaaaaacggcaagtcccgcatccgggtgctcctggccggg
ctcgttgagggcattgtccgcaagcccaccaaatccggggggatgatgtgcaagttcatg
ctgggggatgagaccggtgcggtggaggtggtggcctttgggcgctcgtatgacaaggtc
tcgccgcgggtgcgcgaggatgccccggtgttgctggtggccgaggtggagccggacgga
gaaggggaaaccttacgggtggtggcccaggacgtgtacccctacaacgaactcgaggga
ctccccaaggtgatggaactcgagctggacctagccctcctggacgatgagaagatcaac
gaattggggagcctttttgacgagtacaccggcctcgtgccggtgcatctaaaaattcaa
ggtagcgattgctgggctttgatagaggtccggcctcgtgtagacgagaatgccaaggat
gccttggccggactcgactgggtgagggccaagctgatccccgaccgggacgccctgctg
gcggtggcggcagccccggctcgagggcagaacggcggcgatccccaagggccggtggtg
ccgttttag
DBGET
integrated database retrieval system
