Allomeiothermus silvanus: Mesil_1121
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Entry
Mesil_1121 CDS
T01246
Name
(GenBank) WD40 repeat, subgroup
KO
K14558
periodic tryptophan protein 2
Organism
msv
Allomeiothermus silvanus
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Mesil_1121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msv03009
]
Mesil_1121
Ribosome biogenesis [BR:
msv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Mesil_1121
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_DCAF4
eIF2A
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_DCAF12
PROPPIN
DUF7165
WDR54
Motif
Other DBs
NCBI-ProteinID:
ADH63026
UniProt:
D7BDA8
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Position
complement(1112523..1114349)
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AA seq
608 aa
AA seq
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MHWTLALGMAFGLAWAQLSPAGEFSGHRSPVTAVAYSPDGRTLALAADLYIQLYQGYTLK
RTLRGHTDTVRSLAFNSDGTLLLSGSADGTLRLWNPTSGYSVRTLPASGEIWSAGFIPDG
EEVFGAGSEGKIWLWNRMGRLTRTLEAQGGWIYSAAFSPNGKTLVSGGLDGKARIWSAEG
SLQSSLSSGGGIYALAFAPEGDRFAVGNRDGAVWVWGLGGELRQMLPAHRLPVSALAYGP
GGVLASAGQDEKIVVWNARGQKLRGLSPGATALALAFSPDGHTLLSGGDDGRAWRWNTAT
GRAEGVLEPFAASVFALAYSPDGRILASGGADKTVRLWDGQGRLLRTFSGPMLALTTLAF
SPDGKILAGGSQDGWIWLWEAASGKLLRQLGPHDNGAWALAFHPTLPLLVSGGGDELLKF
WNPNTGRLLRDFRAHESTVLAASFSPDGQTLASAGADGTIRLWSTGGQPLRSLPPPRPGY
VGQGDIVEPSHAGAVYALAYSPDGRMLASASHDNTLKLWDLRTGQELRVLRAHTNAVQKV
IFSPDGKSLLSAAWDQTVRLWSLEGRLLQTLPGFSRPLYALAWSPRGILAVGSGTAARGG
TISLFRLR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcattggacgttagccttggggatggcctttggcctagcatgggcccagctctcgccc
gccggagagttctccgggcaccgcagcccggtcacggcggtcgcctatagccccgatggg
cgaaccctagccttggccgccgacctctatatccaactctaccagggctacacgctaaag
cgcaccctgcgggggcataccgacaccgtgcgctccctggccttcaactccgatggcacg
ctcctgctctcaggcagcgcggacggcaccctgcggctttggaaccccaccagcggatac
agcgtgcgcaccctgcccgcaagcggcgagatctggtcggcggggtttattcccgatgga
gaagaggtcttcggggcgggttcagagggaaaaatttggctgtggaaccgtatgggtagg
cttacccgaacccttgaggcccagggaggctggatctacagcgcggccttcagccccaac
ggcaagaccctggtgagcggggggctggacgggaaggcacgaatctggagcgccgaggga
agcttgcagagtagcctgagcagcggcgggggaatctacgcgctcgcttttgccccggaa
ggagaccgcttcgccgtaggcaaccgcgatggggcagtgtgggtgtggggcttgggaggc
gagttgcggcaaatgctcccggcccaccggctgccggtgagcgccctggcctatggcccc
ggtggggtgctggccagcgccggacaggacgagaagatcgtggtgtggaacgctcgaggc
caaaaactgcgcggcctctcccccggggccaccgcgctcgccctggccttcagcccagac
ggccacaccctgctgagcgggggcgacgacgggcgggcttggcggtggaataccgccacc
ggacgcgccgagggggtactcgagccgttcgccgcatcagttttcgcactggcttacagc
cccgacggacgcatcctagccagcgggggtgccgacaagacggtgcggctatgggatggg
cagggacgtctgctacgaaccttctctggccccatgctggccctcaccaccctggccttt
agcccggacggaaaaatcctggcaggtggcagccaagacggctggatctggctgtgggag
gctgccagcggaaagctgctgcgtcagctgggtccgcatgacaacggtgcatgggcacta
gccttccaccctaccctgcccctattggtaagcggaggcggggatgaactcctcaagttc
tggaaccccaacaccggacggctgctccgcgacttccgcgcgcacgaatcaaccgtgctg
gcagcgagcttcagcccggatggacaaactttggccagcgccggagccgacggtacgatc
cgcttgtggagcaccgggggccagcccctccgaagcctccccccgccccgccccggctat
gtcgggcaaggtgatatcgtcgagccgagccacgccggagcggtctacgctctggcctac
agccccgatgggcgtatgctggctagcgccagccacgacaacaccctaaaactgtgggat
ctccgaaccggccaggagctccgggtcttacgggcccacaccaacgccgtgcaaaaggtc
attttcagccccgatggcaaaagtttgctgagcgcagcttgggaccaaaccgtacgccta
tggagcctagaaggtcgcctcttacagactttgccgggattctcgaggccgctgtatgcc
ctagcctggagccctcgaggcatcctcgcagtgggcagcggtaccgccgcgagaggcgga
acaatcagcctatttcgcctgaggtaa
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