Allomeiothermus silvanus: Mesil_1191
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Entry
Mesil_1191 CDS
T01246
Name
(GenBank) Helix-hairpin-helix DNA-binding class 1
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
msv
Allomeiothermus silvanus
Pathway
msv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mesil_1191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msv03400
]
Mesil_1191
Enzymes [BR:
msv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mesil_1191
DNA repair and recombination proteins [BR:
msv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mesil_1191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
HHH_5
UvrD-helicase
AAA_11
SH3_13
AAA_16
SLFN-g3_helicase
PhoH
AAA_22
Helicase_RecD
HHH
AAA_14
HTH_Tnp_Mu_1
HHH_2
DUF7055
DprA_N
PIF1
T2SSE
AAA
Tubulin
AAA_18
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADH63089
UniProt:
D7BDT8
LinkDB
All DBs
Position
1176556..1178289
Genome browser
AA seq
577 aa
AA seq
DB search
MDHSKLTKLTGVGPALAERIANHFGSEAEALAALSENPYRLMEVEGIGFRRADCIAQAHF
GISPDDPIRHGYGNDWVLRQAGGRMPLDLYQARRMEIGLFDRRYELWGAFCDILLEPDLQ
DSPEFAQYVWLEPELRAEQSLARFLVKATRPTTNPFIMPNGIPTYLNEAQVNAVLKMSCP
GFVPALCVTGGAGTGKTTVIAEAVRRLGAGAARIMTFTGKAAQRVRQALAGRGCEDFAEV
STLHRGLDYKPGEGFRRERFTESVVIIDEASMVPNWLLAQVVTRLEPLATLVLVGDVAQL
PPIDAGFPFKDFIDAGVHTVTLTQNYRQENQREIFELAEAVRTRALQPPPLHASICATNL
SAYEFNYWCEALLDPDQLPPLLDWQAITYRNADRERINLELQKIFNPHGGKAFEYWPRAL
PKEERKPITVKTGDKIAVRANVYSLEVMNGQTGIVRDVKLDRETYEPVSVIVEIEGRSVE
VPLELAPDLLELGYCITTHKAQGSGWKEVFILQPGAVGFDSRRWWYTAISRAEEQLAILT
QMGTRTWWANATKPMPFEPSSLLARFQRYASQPVGVR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaccacagcaaactcaccaaactcactggggtgggacccgccttggccgagcggatc
gccaatcactttgggagtgaagccgaagccctggcggccttgtctgaaaatccctatcgg
ctgatggaagtagaaggcatcggttttcgccgggctgactgcattgcccaggcgcatttt
gggatttcccctgatgaccctatccggcacggctacggcaacgactgggttttgcggcaa
gccggggggcggatgcccctcgacctctaccaggccagacgaatggagatcggactcttt
gatcgtcggtacgagctatggggagctttttgtgacatcctcctagaacctgatttgcaa
gattccccggagtttgcgcagtacgtttggctagagcccgagcttagggccgaacaaagt
ttggcccgctttttggtaaaggcgacgcgaccaaccactaacccttttatcatgcctaac
ggcattcctacttatctaaacgaggctcaggtaaatgcggtattgaagatgtcctgcccc
ggatttgtccccgctctttgcgtcacgggcggggcagggacgggtaagaccacggtgatc
gctgaggcagtgaggcggttaggggccggggcagcaagaatcatgacgtttacgggaaag
gccgcccagcgggttaggcaggcactcgctgggcgtggttgtgaggattttgccgaagtc
agcacgctgcatcgcggattggattacaaacccggggagggattccgcagggaacgcttt
acggagtccgttgtaatcatcgacgaagccagcatggtgcccaattggctgctggcccag
gtagtgacgcggctagagcccttggcaacgctggtgctagtcggcgacgtggctcagttg
ccgccaatagacgccgggttccccttcaaagactttatcgacgctggggttcacaccgta
actctgacccaaaactaccgccaggaaaaccagcgggaaatttttgagctggccgaagca
gtacgaactcgagccctccagcccccacctttgcatgcctcgatctgcgccaccaatctt
tccgcctacgagttcaactactggtgtgaagccttgctcgacccagatcagctaccccct
ttgctggactggcaagccatcacgtacagaaacgctgaccgcgagcggatcaacctggag
ttgcaaaaaatattcaacccccacggggggaaagctttcgagtactggccccgcgccctc
cccaaggaagaacgaaagccgatcacggtaaagacgggggacaaaatcgcggtgcgggca
aatgtttactccctggaggtgatgaacggtcagaccgggatcgtccgggatgttaagctc
gaccgcgaaacctacgaaccggtttcggtaattgtagaaattgaaggacgaagtgtagaa
gttccgttggaactggctccagatctcctcgagttgggctattgcatcaccactcacaag
gcccaggggtcggggtggaaggaggtgtttatcttgcagccgggggcagttgggtttgac
tcccggcgctggtggtatacggcgatctcgcgagctgaggaacagctcgcaatcctcact
caaatgggaaccaggacctggtgggccaatgccaccaagcctatgcccttcgagccgagc
agcttgctcgcgcggttccagcgttacgcctcccagccggtgggggttcgttga
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