Allomeiothermus silvanus: Mesil_1583
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Entry
Mesil_1583 CDS
T01246
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msv
Allomeiothermus silvanus
Pathway
msv03030
DNA replication
msv03430
Mismatch repair
msv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mesil_1583
03430 Mismatch repair
Mesil_1583
03440 Homologous recombination
Mesil_1583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msv03032
]
Mesil_1583
03400 DNA repair and recombination proteins [BR:
msv03400
]
Mesil_1583
Enzymes [BR:
msv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mesil_1583
DNA replication proteins [BR:
msv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mesil_1583
DNA repair and recombination proteins [BR:
msv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mesil_1583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
SGNH
Motif
Other DBs
NCBI-ProteinID:
ADH63471
UniProt:
D7BFB8
LinkDB
All DBs
Position
complement(1580450..1581061)
Genome browser
AA seq
203 aa
AA seq
DB search
MLKRLLRRTPALPWEEVVYWALDLETSGLKPQDQILSVGMVPIRKGVIRYGEHFYSLVRP
HRFDTLSLEGLRAHQIRPFELREAPPLCQVLREVHQRLKEGVLLVHHALVDVAFLRRAYA
RCDLVWPEPQVVDTVKLLHKLGQRRALLEPHPETPPENLAKARAFLDLPPYTAHHALTDA
LATAEIFLVLRAKLGIRTLRELV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgcctgctacgacgcacccccgcattgccttgggaggaagtggtgtactgg
gcgcttgaccttgagaccagcgggctcaaaccccaagatcaaatcctctcggtgggcatg
gttcccattcggaaaggggtgatccgctacggggagcacttttacagcttggtgcgcccc
caccgtttcgacacgctctcgctcgaggggctgcgggctcaccagatccgccctttcgag
ctgcgtgaggcccccccgctttgccaggtcttgcgcgaagttcatcagcggctcaaagag
ggggtcttgctggtccatcacgctttggtggacgtagcgtttttgaggcgcgcgtatgcc
cgttgcgacctggtttggcccgagccacaggtagtagataccgtcaaactgctgcacaag
ctcggccaacggcgagcgctgctcgagccccaccccgaaacacctcctgagaatttggcc
aaggcgcgggcctttcttgatctaccaccttacaccgctcaccacgctctaaccgatgcg
ctcgctaccgcggagatatttttggttctgcgcgccaagctaggaatccggacgttgcgc
gaactggtttag
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