Allomeiothermus silvanus: Mesil_2038
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Entry
Mesil_2038 CDS
T01246
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
msv
Allomeiothermus silvanus
Pathway
msv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mesil_2038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msv03021
]
Mesil_2038
03019 Messenger RNA biogenesis [BR:
msv03019
]
Mesil_2038
Transcription machinery [BR:
msv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Mesil_2038
Messenger RNA biogenesis [BR:
msv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Mesil_2038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
NACHT
AAA_25
Spore_III_AA
AAA_22
ATPase_2
AAA_24
AAA
AAA_14
DUF4537
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ADH63910
UniProt:
D7BH57
LinkDB
All DBs
Position
2037997..2039289
Genome browser
AA seq
430 aa
AA seq
DB search
MRTARGKKTATEPTSLSYQELSAKILPELHLIAAQQGIEDYKKMGKDDLVMALLQQEATG
EGLKLAKGYLEISSDGYGFLQENLYNLETRSVIVSAGLIKQHQLRTGDYVVGKARPPREN
ERYGTLMRVEAVNNLDPEAAARRPKFDELIPQFPDRQLRLETTPDEMSTRVIDLLSPIGR
GQRGLIVAPPKAGKTTLLKKIAKAILKNEPDVKVIVLLIDERPEEVTDFRESVEGAEVIA
STFDEPPQNHIRVAEFVHERSRRIVEEGGHVVILLDSITRLARANNLVTPPTGRTLSGGL
DSAALHFPKRFLGAARNIRGGGSLTILATALVETGSRMDDVIFEEFKGTGNMELQLNRRL
EERRIFPAIDISKSSTRREELLLGEEVLQKVWLLRKVLADMDPAEAMEMLLSRLSRTKSN
KEFLATLAGK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccgcgcgcggcaagaagaccgctaccgaacccacctctctgtcgtatcaagaa
ctctccgctaagatcctgcccgagctacatctcatcgctgcccaacagggcatcgaggac
tacaagaaaatgggcaaggacgacttggtcatggccctgttgcaacaggaggctaccggg
gagggcctaaagctggccaagggctatctcgagatcagctctgacggctatggcttcttg
caggaaaacctgtataacctcgagacccgctcggtcatcgtctcggcgggcctgatcaag
cagcaccagctccgcaccggcgattacgtggtgggcaaagcccgccctccgcgcgaaaac
gagcgttatggcacgctgatgcgggtagaagcggtcaacaatctagaccccgaagccgcg
gcccgcaggcccaagttcgatgaactcatcccccagtttcctgatcggcagcttaggctc
gagaccactccagatgagatgtccacccgggtcatcgacctactctcgcccatcgggcgg
ggacagcgcgggctgatcgtagcgccacccaaagcgggtaagactaccctgctcaagaag
atcgccaaggccatcctcaaaaacgagccggatgtcaaagtgatcgtgctgctcatcgat
gagcgccctgaggaggtcaccgacttccgcgagagcgtggagggggccgaggtcattgcc
agtaccttcgacgaacccccccagaaccacattcgggtggccgagttcgtacacgaacgc
tcccgccgcatcgtagaggagggtgggcacgtggtgatcctgctggacagcatcacccgt
ttggcgcgggcaaataacctggtcactccgcctaccgggcgtacactatcgggtggcttg
gactcggcggccctgcactttcccaaacgcttcttgggggcggcccgcaatatccgcggg
ggaggctcgcttaccatcttggccacggccttggtcgagaccggcagccgcatggacgac
gtgatcttcgaggagtttaagggaaccggaaacatggaactgcagctcaaccgccgtctt
gaggagcgccgcatcttcccggctatcgacatctccaagtcttccacccgccgtgaagaa
cttctcttgggcgaggaagtgctgcaaaaggtctggctgctgcgcaaggtattggccgac
atggaccccgctgaggcgatggaaatgctgctttctcggctttcccgcaccaagagcaac
aaggagttccttgcaactttggcgggaaagtag
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