Allomeiothermus silvanus: Mesil_2879
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Entry
Mesil_2879 CDS
T01246
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msv
Allomeiothermus silvanus
Pathway
msv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mesil_2879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msv03021
]
Mesil_2879
03400 DNA repair and recombination proteins [BR:
msv03400
]
Mesil_2879
Enzymes [BR:
msv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mesil_2879
Transcription machinery [BR:
msv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mesil_2879
DNA repair and recombination proteins [BR:
msv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mesil_2879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
RAD51D_N
HHH_8
HHH
Npun_R1517
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADH64720
UniProt:
D7BCY7
LinkDB
All DBs
Position
complement(2940458..2941417)
Genome browser
AA seq
319 aa
AA seq
DB search
METTKTKAPVFTAKVDGNYGEFVLEPLERGFGVTLGNPIRRILLSSIPGTAVTSVYIEDV
LHEFSTINGVKEDVVQLILNLKELVVKFHTPGSKTLTLRAQGPRSVYARDLEVPADAEVV
NPDLYLATLGEGARLVMEVRVDEGVGYVPAEKHGIKDRISSIPVDALFSPVRRVAFQVED
TRLGQRTDLDKLTLRIWTDGSVSPMEVLQRSVAILREQLSFFDQSPVIRVEKEKPAPVAA
APAPSPATPAAAAVSTGLTLDDLGLTTRVLHNLKEEGIESVESLLALSERELKKVPGIGE
RSLQEIKDILAQHGLEMKP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaccaccaagaccaaagccccagtatttaccgccaaggtggacggcaactacggc
gagttcgtgctcgagcccctcgagcggggcttcggcgtgactttaggcaaccccattcgc
cgcattctgctctcctcgattcctggaaccgccgttaccagcgtgtacatcgaggacgtg
ttgcacgagttctcgaccatcaacggggtcaaagaggacgtagtgcagctcatcctaaac
ctgaaagagctggtggtgaaattccacacccccggttccaagacccttaccctgcgggcc
cagggaccccgctcggtgtacgcccgtgacctcgaggttcctgccgacgccgaggtggtg
aaccccgacctgtacctggcgaccctcggcgagggggcccggctggtgatggaggtgcgg
gtggacgagggtgtgggctacgtgcccgccgagaagcacggcatcaaagaccgcatctcc
tcgatccccgtggatgcccttttctccccggtgcgccgggtagccttccaggtagaagac
acccgcttgggtcagcgtaccgacctggataagcttaccttgcgcatctggaccgatggc
tcggtttccccaatggaggttctccagcgatcggtggcaattctgcgcgagcaactctcc
ttcttcgaccagtccccggtaatccgggtggagaaggaaaagccggccccggtagctgct
gctcccgctcccagcccggcgacccccgcggcggccgcggtttccaccggtcttaccctg
gatgacctagggcttaccacccgggtactgcacaacctcaaggaggagggcatcgagagc
gtggaaagcctcttggctctctccgagcgggaactcaagaaagtaccgggcatcggtgag
cgcagcctgcaagagatcaaagacatcctggcccagcacgggttggagatgaaaccctaa
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