Allomeiothermus silvanus: Mesil_3367
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Entry
Mesil_3367 CDS
T01246
Name
(GenBank) hypothetical protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
msv
Allomeiothermus silvanus
Brite
KEGG Orthology (KO) [BR:
msv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msv03016
]
Mesil_3367
Enzymes [BR:
msv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Mesil_3367
Transfer RNA biogenesis [BR:
msv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mesil_3367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
ADH65179
UniProt:
D7BJ23
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All DBs
Position
pMESIL01:complement(178817..180625)
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AA seq
602 aa
AA seq
DB search
MSFPQASLVIYKGRPALAEAKGDRLELSLLGGEKLKVRPKDVFPLHPGPADLDLKPPEGE
EVEAWELLQGQTVSLKELAELVYGDYTPQAAYGAYRLAQRGERFVLEGERVRARTHEEFA
AWQRAQAAKQARLRAFEEGVERLRTGHLAPEDHPLLAEVEALALGERKESPLLKALGLPQ
TPQAAHGLLLRLGVWRRENPHPRRLGLRLGSMELPVPPLPEEERTDLTHLEAYAIDDEGS
QDPDDAVWAERTEGGFRLLVHVADVAALVEPGSLLDQEAMHRGANLYLPEGTVPMLPPRA
TEVLGLGLQEISPALTFALFVSEEGELLEERLFPSWVRVRRLSYREALEVPPLSPLKELA
EAFGQKRLSQGALDLALPEVKVQVEGEEIRITPLPPYPSRHWVREAMLLAGYAAAHLALR
EGLPFPFATQEAPSRRVQGEGLAALWEQRKALKRAQLKAVPAPHKGLGLPLYAQVTSPLR
RYLDLVAHQQLRAWLKGKRPLSHAELLERVGAAEAVADLVREAERKSRLHWTLLYLMEQG
YQGPGVLVEKRGSQGVFLLPEIGLSTAVLLARPSPLDWEGILRFQGADLPSLETRFALED
PG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttccccaggcgtccctcgtcatctacaaaggcagaccggccctcgcggaggcg
aagggcgaccggctggagctgagcctcttgggtggggaaaagctcaaggtacgtcctaag
gacgtcttccccttgcaccctggccccgctgacctagacctaaagcccccggaaggggag
gaggtggaggcctgggaacttttgcagggccagacggtgagtctcaaggaactggccgag
ttggtgtacggggattacaccccccaggctgcttatggcgcctaccggttagcccaaaga
ggggagcggttcgtcctcgagggggagcgggtacgggcccgcacccatgaggagttcgcc
gcctggcagcgggctcaagcggcgaaacaagcccgcctgcgggctttcgaggagggagtg
gagcgtttgcgcacgggccacctggccccggaagaccaccccctcctggccgaggtggag
gccttggccctgggggagcgcaaggagagcccgctcctgaaggcattgggcctgccccag
accccccaggccgcccacggcctcctgctgcggctgggggtgtggcggcgggaaaacccc
caccccaggcggctgggcctgcgcctcggctcgatggagcttcccgttcccccgttgccc
gaggaagagcggaccgacctcacccacctcgaggcctacgccatcgacgacgaaggaagc
caggatcccgatgacgcggtctgggccgagcggacggaaggggggttccgcctgctggta
cacgtggcggacgtggccgctttggtagagccgggcagccttttggatcaggaggccatg
caccggggggccaacctctacctgcccgagggcaccgtgcccatgcttccccccagggct
acggaggttttggggctgggcctacaggagatctccccggccctcacctttgcgcttttt
gtctccgaggagggggaactcttggaggagcggcttttcccgagctgggtgcgggtgcgc
cgcctcagctaccgggaggccctcgaggtgcccccgctttcccccctcaaggagctggcc
gaggctttcgggcagaaacgcctgtcccagggggccttagacctggccctccccgaggtc
aaagtgcaggtggagggggaggagatccgcatcacccccctcccgccctacccaagccgc
cactgggtgcgggaggccatgctcctggcggggtacgccgcggctcacctggcgctacgc
gaggggcttccttttcccttcgccacccaggaggccccgagccgccgggtccaaggggag
ggcctggctgccctgtgggagcagcgcaaagccctcaagcgggcccagctcaaggcggtg
cccgccccccacaaaggcctgggtttgcccctgtatgcccaggtgacgagccccttacgg
cgctacttggatctggtagcccaccagcagctcagggcttggctcaaggggaaacgtccc
ctttcgcacgcggagcttctggagcgggtcggggcggcggaggcggtggccgacctggtg
cgggaggccgagcgcaagagccggctccactggaccctcctttacctgatggagcagggc
tatcaggggccgggggttctggtggaaaagcggggaagtcagggggtctttcttctcccc
gagatcgggctcagtaccgcggtgcttctggcccggccctcccccctagattgggagggg
atcctccgcttccaaggggcggacttgcccagcttagagacccgcttcgccctcgaggat
ccgggctaa
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