Methanosarcina siciliae T4/M: MSSIT_0009
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Entry
MSSIT_0009 CDS
T03865
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
msw
Methanosarcina siciliae T4/M
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Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
PAS
HATPase_c
PAS_8
HisKA
PAS_3
sCache_3_3
Diguanyl_cycl_sensor
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AKB26728
UniProt:
A0A0E3P2S8
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Position
9832..12063
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AA seq
743 aa
AA seq
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MLFTQAPVSIIIIDKESGEIIDANPKTCEMYGYSSFEQLNAKNLCLNTPYSFNDALSLIH
KAAIEGTQEFEWLSMNANNEYFWQHVRLSLVTINGVERVMATTIDITKRKNAEIALMNSE
GQLRTLVNTIPDMVWLKDVEGVYLRCNTKFERYFGAKEAEIVGRTDYDFVDKKLADFFRL
KDIEVLEAGKPLMNEELITYADDGHKEYMETIKCPLYDSSGKLIGVLGVGRDISERKRAG
DRFAEEIFRRRILIEQSNDGIVVVNDKGEVVEANQKYADMLGYSMDEVLQLHIWDWDNQW
TPEELIKIINSTDESGLKFETRHRRKDGTLLYIEVSSNGAILDDQKLAFCVCRDITERKR
AEENLKKAEQKYRRAYKLLQGVIESPKDVVIFALDKDYRYIAFNKNHQMTMKNIWGAKIE
IDVSMLNYINNPVDVEKEKANFDKVLAGEAFTIVEEYGDFLLERRWKKNVYSPLEDDEGN
VIGLTLFLTDITKSKQAEFALLEAKALAEESNKVKSEFIANMSHELRTPLNSVIGFSQIL
NEKMFGDLNEKQMCYVSNILKSGNHLLELINDILDISKIESGNMEYAPEIIDLQEVIDEI
IVLMGPLIKEKNLNLEVNVEFEKLEIKADKLKIKQIIYNLLSNAIKFTPKSGKVWFDSKI
MNGNVQISVSDNGIGIPLQYQKVIFDPFKQISSFSNRAHDGTGLGLAIAKHYVEMHLGEI
HVESEVGKGSTFTFTIPIDLRND
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcacacaagcacctgtttcgataatcataattgacaaggaaagcggtgagatt
atcgatgccaatcctaaaacctgtgaaatgtatggttattcttcattcgagcagttaaat
gcaaaaaatctctgcctgaacacaccttattcctttaatgatgcactcagtttgattcat
aaagctgccattgaagggacacaagaattcgaatggcttagtatgaatgcaaacaatgaa
tatttctggcaacacgtccgattgagccttgtgaccatcaacggtgtagaaagggttatg
gcaacaacaattgacataactaaacgtaagaatgcagaaattgcactaatgaatagtgag
ggacagctgcgtacattggtaaatactattcccgatatggtttggctaaaggatgtcgag
ggagtatatctcaggtgcaataccaaatttgagcgttactttggtgcaaaagaagcggag
attgttggaaggaccgattatgattttgttgataagaaacttgcagattttttcagacta
aaggatatcgaggtattagaagctggcaagcctttaatgaatgaggaattaattacctat
gctgatgatggacataaagaatacatggaaacaattaaatgtcctttgtatgattccagt
ggaaaactcataggagtgttgggtgttggcagagacatttccgaaagaaagagagctgga
gacaggtttgcagaggaaattttcagaaggcgtattcttatagaacagtccaatgatggc
atagttgttgttaacgataaaggtgaggttgttgaggctaaccagaaatatgctgatatg
ctgggctattccatggatgaagttctccagttacacatatgggattgggacaaccaatgg
acacctgaagaattaattaaaatcataaatagtactgatgagtctggccttaaattcgag
acacgccaccgtcgtaaggatggaactttactctatatcgaagttagctcaaacggagct
attttagatgatcagaaactagctttttgcgtgtgcagggacattactgaaagaaagagg
gctgaagaaaatctgaaaaaagcggaacagaaatacaggcgggcatacaagctcctgcag
ggagttattgaaagtcccaaggatgttgtcatattcgctcttgataaagattaccggtac
atcgcctttaataaaaatcatcagatgacgatgaaaaatatatggggtgcaaagatagag
atcgatgtcagcatgcttaattacatcaataatcctgtagatgtggaaaaggaaaaagct
aattttgacaaagtgcttgcaggcgaagccttcactattgttgaagaatacggtgatttc
ttactcgaaagacgatggaagaagaatgtgtacagtcctcttgaggatgacgaaggaaat
gttattggacttacgctgttcttaacagacataactaaaagtaaacaggctgagtttgct
cttcttgaggctaaagccttggctgaagaatcaaataaagtaaaatcggagttcattgca
aacatgagccatgagcttcgcacaccactcaattcggttattggtttttcccagatcttg
aatgagaaaatgtttggagatttaaatgaaaaacaaatgtgttatgtctccaatatcctg
aaaagtggtaatcatctgttggaattgatcaatgatatactcgatatttcaaaaatagaa
tcaggcaacatggaatatgcgcctgaaataatagatctccaggaagtaatagatgaaatc
atagtattaatgggccccctgatcaaagagaaaaatcttaatctggaagtcaacgtggaa
ttcgaaaagctagaaataaaagctgataaattaaagatcaagcagatcatttataatctt
cttagtaacgcaatcaaattcacacctaaaagcggtaaagtgtggtttgattctaaaata
atgaatggcaatgttcagatttccgtatctgataacggcataggcattcctctgcaatat
caaaaagttatatttgacccatttaaacagatcagctcgttttcaaaccgtgctcatgac
ggaactggattaggccttgcaattgctaaacattacgtagaaatgcatttaggggaaata
catgttgaaagtgaagttggtaagggaagcacattcacgtttacaataccgattgatttg
agaaatgattga
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