Methanosarcina siciliae T4/M: MSSIT_0157
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Entry
MSSIT_0157 CDS
T03865
Name
(GenBank) Helicase, SNF2/RAD54 family
Organism
msw
Methanosarcina siciliae T4/M
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
HMMR_N
MG280
AKNA
EXOC6_Sec15_N
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
AKB26876
UniProt:
A0A0E3L7J4
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Position
186967..190227
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AA seq
1086 aa
AA seq
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MIILHAGRVGKQFFLWGESPAENETPPVRRGRKPKKPVAKPYPYDSGVENLSSALELLLG
STGRKKAEEINVWVPTAGWNPIPSSPLVAETPASKAEPAFAPWTVHAYPLEAEEAVVLLC
ACMGKKVLAPGIISGNDLLWWADALKFAGSLVAGQKYLPGVRGGEGEYRAFWEPVFSGED
AGELAKLAKQMPPAAKALAPEASSVPPEMPAAVVARQFIEESLDWIVRSEIGEKELAKGT
RKRKSFDSVHDAWVSALKSSDGLIYGEENELLQLAVRAREWQRPLTVLTTSPFRFCFRLE
EPAMEEGTEETEETEAGKIDTEKGGKGIADIEVPEELWYVRYMLQSYEDPSLLIPVKEAW
KPKKGSPLKRYDVKNIRQFLLSSLGQAAGISAGIASSLESPNPSGYSLDTKEAYRFLTES
AANLSQAGFGLLLPGWWTRKGTKTSLKAQAKVKGKKKLQAGYGLTLDKIVSFDWEIALGD
RALTIRELQSLAKLKAPLVKFRGQWVEVNDAEIRAALEFWKKTPNGEASLREVLKLAVGV
SEKTDGVDVEGLNATGWIEELIRRLKDKTGFEELPAPDGFSGALRPYQFRGYSWLAFLRQ
WGIGACLADDMGLGKTVQTLALIQHDLEQVKDQVDQVEEKVEEIAKEIAEEKVDGLKAAK
PVLLVCPTSVINNWKKEAARFTPGLSVMVHHGTSRKKEEEFKKEAINHAIVISSYGLLQR
DLKFLKGVSWAGVILDEAQNIKNPETKQAKAARALEADYRIALTGTPVENNVGDLWSIME
FLNPGFLGSQAGFKRNFFIPIQAERDQEAASRLKEITGPFILRRLKTDTSIISDLPEKME
MKTYCTLTKEQASLYAAVLEDIEEAMEEAEEGIRRKGIILSALTRLKQVCNHPAQFLKDN
STVSGRSGKLARLTEMLDVVLENGEKALVFTQFAEMGKMLKEHLQASFGCEVLFLHGGVP
RKQRDRMLERFQEGKEYLPIFVLSLKAGGTGLNLTGANHVFHFDRWWNPAVENQATDRAF
RIGQTKNVEVHKFICAGTLEERIDEIIERKVQVAENVVGTGEGWLTELSNEELKDILALR
EEAVGE
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgataattcttcatgcaggaagagtcggaaaacagttcttcttatggggtgaaagcccg
gctgaaaatgaaactccgcctgtccggcgcgggagaaagcctaagaagccggttgcgaaa
ccttacccttacgattcaggcgttgaaaacctgtcttctgcccttgagctgctgctaggc
agtactggccggaaaaaggcagaggaaatcaatgtctgggtccctacagcaggctggaat
ccaatcccttccagtcctctcgttgctgaaactcctgcttcgaaagcagaacctgccttt
gctccctggactgttcatgcatatcccctggaagctgaagaagctgttgttctcctctgt
gcctgtatgggaaaaaaggttcttgctcccggcataatctcgggaaatgaccttctctgg
tgggcggatgccctgaaatttgcaggctcgctggtagcaggccagaaatacctgcctggc
gtcaggggcggggagggagagtacagggctttctgggaacccgtattttccggagaagat
gcgggagagctggcaaaacttgcaaagcaaatgcctccggctgcaaaggctcttgctcct
gaagcctcttccgtgccgccggaaatgcctgctgctgtagtggcaaggcagtttatcgaa
gagtctcttgactggatagtccgatccgagataggggaaaaagagcttgcaaaagggacg
cgcaaaagaaaatcctttgatagcgtccatgatgcctgggtttctgctcttaaaagctct
gacgggctgatctacggagaagaaaatgaactcctgcagcttgcggttcgagcccgtgaa
tggcagcgcccccttactgtacttacaacttcccccttcaggttctgtttcaggctagaa
gaaccggctatggaagaaggaaccgaagaaaccgaagaaaccgaagccggaaaaattgat
actgaaaaaggtgggaaagggatagctgacatagaagttcctgaagaactctggtatgtc
cgctacatgcttcagtcctatgaagatccgagccttcttattcctgtaaaagaggcgtgg
aagccaaaaaagggcagcccgttgaaacgatatgatgtgaaaaacattcgccaatttctg
ttatcttccctcgggcaggctgccggcatcagtgcaggaattgcttccagtcttgaatct
cccaacccatccggatattcccttgatacgaaagaggcttaccgcttcctgactgaaagt
gcagcgaatttaagccaggcgggtttcgggctgcttcttcccggttggtggactcgtaaa
ggtacaaaaactagtttaaaagcccaggctaaggttaagggcaaaaagaagttacaggcc
ggatacgggctaaccctcgataaaatcgtcagctttgactgggaaatcgcccttggagat
cgtgcactcacgatcagggaacttcagtctcttgcaaagctcaaagctccgcttgtgaag
ttccgcggacaatgggtcgaggtaaacgatgcggaaatccgggctgcccttgagttctgg
aagaaaactcccaacggggaagcaagtctgcgtgaagttttaaaactggcagttggagtt
tccgaaaaaaccgatggtgtggacgttgaagggctcaatgctaccggctggatagaagaa
ttaatccgtcgcctgaaggacaaaaccggatttgaagaactcccggctcctgacggtttt
tcaggtgccctccggccctaccagttcagaggttattcctggctggctttcctgaggcag
tggggcataggagcctgccttgcagacgacatggggcttggtaaaaccgtccagaccctt
gctcttatccagcacgacctggaacaggttaaagatcaggttgatcaggttgaagaaaaa
gttgaagaaattgctaaagaaattgctgaagaaaaagttgacggacttaaagctgcaaaa
ccggttcttctggtctgcccgacttctgtcatcaacaactggaaaaaagaggcggcccgc
tttaccccgggactttcggtaatggtccaccacgggaccagccggaaaaaagaagaagaa
ttcaaaaaggaagccataaatcatgctattgttatctcaagctacgggcttttgcagcgg
gatcttaagtttttaaaaggggtctcctgggccggagtgatacttgatgaagcccagaat
atcaaaaacccggaaactaaacaggcaaaagccgcccgggctcttgaagctgattaccgc
atagctcttacggggactccggttgaaaacaacgtgggggatctctggtccataatggaa
tttttaaatcccggcttccttggcagccaggcaggtttcaagcggaatttctttattccc
attcaggccgaaagggatcaggaagctgcaagtaggttaaaagaaattacaggtcccttt
atcctgcgccgtctgaagaccgatacttcgattatctccgacctgccggaaaaaatggaa
atgaagacctattgtacgctgacaaaagaacaggcctccctctatgccgcagtcctcgaa
gacatcgaagaggcgatggaagaggctgaagaaggcatccggagaaaaggtataatcctg
tctgcccttacaaggctcaagcaggtctgcaaccacccggctcagtttttgaaggataac
tccactgtatccggaaggtcaggaaaacttgcaaggcttaccgaaatgctggacgtagtc
ctggaaaacggggaaaaagcccttgttttcacccagtttgcggagatgggaaaaatgcta
aaagaacacctgcaggcaagcttcggctgtgaagtccttttcctgcacgggggagtcccc
agaaagcagagggatcggatgcttgagcgcttccaggagggaaaagaatacctccctatc
tttgtcctctcccttaaagccggaggcacggggcttaaccttacaggagcaaaccacgtt
tttcacttcgatcgctggtggaatccggctgttgaaaaccaggctacggacagagcgttc
cgtataggccagacgaaaaacgttgaggtgcataagttcatctgtgcgggcacgcttgaa
gaaagaatcgacgagattatcgagcgcaaagttcaggtcgcagagaacgttgtcgggacc
ggggaaggttggctgacggaactttccaacgaggaactgaaggatattcttgctcttcga
gaagaggcggtaggtgaataa
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