Methanosarcina siciliae T4/M: MSSIT_0171
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Entry
MSSIT_0171 CDS
T03865
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msw03016
]
MSSIT_0171
Enzymes [BR:
msw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MSSIT_0171
Transfer RNA biogenesis [BR:
msw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSSIT_0171
Prokaryotic type
MSSIT_0171
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKB26890
UniProt:
A0A0E3P348
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All DBs
Position
209352..210161
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AA seq
269 aa
AA seq
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MRVALKLAYIGTEFHGSQIQPNVETVEKELFKALRNLRIIESPKSASYTCAGRTDAGVHA
LGQVVAFDTEKPNLAIPRVINSELPPAIWAWAHAEVPYYFDARRSAVSRHYRYVMSGDDY
DISKMREASKLLLGTHNFENFSRANGEKSTVRTLERINVRLDGEITKIDVVGNSFLWNMV
RKIVTALSMIGNGVRDNDWLLQMLNPDIYEEGIEPAPPYGLTLMGVNYGENIEWIEDDYS
IRRAGEQNHKRILRHRVMAEVLEELISHE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgctttaaaacttgcatacataggcaccgagtttcatgggtcccagattcag
ccgaatgttgagaccgtggagaaagaactcttcaaggctcttcggaacctcaggattata
gaaagccccaaatctgcgagctatacctgtgcgggcaggactgatgcaggagtccatgcc
ctcggacaggttgttgcttttgatacggaaaaaccgaacctggcaattccaagagttatc
aactccgaactccctccggccatatgggcatgggctcatgcggaagtcccctactacttt
gatgcaaggagaagtgcggtttccaggcattaccgctacgtgatgagcggcgatgattat
gatatttcaaagatgagggaagcttcaaaactgttgctcggaacccacaattttgaaaat
ttttccagggcaaacggtgaaaaaagtactgttcgcactctggagaggatcaacgtccgt
ttagacggggaaattacaaagattgatgttgttggtaacagttttctctggaacatggta
agaaaaatagtgacagctctctcaatgatcggaaacggggtgcgtgataatgactggttg
ctccagatgctgaatcccgatatttatgaagaaggaatcgaaccggctcctccctacggg
ctaacccttatgggagtaaattatggagaaaatatagaatggattgaagatgattactcg
atcaggcgggcaggtgagcagaaccacaaacgcattctcagacacagggtaatggctgag
gtgctggaagaactgatttcccatgagtga
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