Methanosarcina siciliae T4/M: MSSIT_0230
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Entry
MSSIT_0230 CDS
T03865
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSSIT_0230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msw03000
]
MSSIT_0230
03021 Transcription machinery [BR:
msw03021
]
MSSIT_0230
Transcription factors [BR:
msw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MSSIT_0230
Transcription machinery [BR:
msw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MSSIT_0230
RNA polymerase III system
TFIIIB
MSSIT_0230
RNA polymerase I system
SL1/TIF-1B
MSSIT_0230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
AKB26949
UniProt:
A0A0E3P147
LinkDB
All DBs
Position
277195..277722
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AA seq
175 aa
AA seq
DB search
MASTALATEFDLVKIMDSGLEGAEYNKTKFPGLVYRIDNPKAAFLIFTSGKVVCTGAKTI
NNAHKAIINLANKLKDIGCDKINLEPEIHVQNIVASADLKTTLNLNTIAIAFGLENVEYE
PEVFPGLIYRVEAPRVVVLVFSSGKLVITGGKCEEDCNGGLRIVRKEFDNLGLLC
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtggcatctaccgcgttggcgacagaattcgacttggtaaaaataatggattctgggttg
gaaggtgcagagtataacaaaacgaagttcccaggcctcgtatacagaattgataacccc
aaagctgcctttctaattttcacctccggaaaagtggtatgcactggagctaagactatc
aataatgcccataaagccataatcaatctggctaacaaactaaaggacatcggctgcgat
aaaataaatctcgaacctgagatacatgttcagaacattgtggccagtgctgatttgaaa
acaacccttaacctgaacaccattgctatagcttttggcctggagaatgtcgaatatgag
ccagaggtgtttcctgggcttatttatagagtcgaggctcccagggtagtagtgcttgtg
ttcagctctggcaagctggtaatcacaggtggaaaatgtgaggaagattgtaatgggggt
ctacggatcgtcagaaaagagttcgacaacttaggacttctctgttaa
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