Methanosarcina siciliae T4/M: MSSIT_0240
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Entry
MSSIT_0240 CDS
T03865
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msw03000
]
MSSIT_0240
Transcription factors [BR:
msw03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSSIT_0240
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_27
HTH_IclR
HTH_34
DnaD_N
HTH_46
GntR
PadR
ULD
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AKB26959
UniProt:
A0A0E3P3A8
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Position
288905..289678
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AA seq
257 aa
AA seq
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MFSPLNPQLIRNLEKLGLTENEAKAYVGVVSLREATAREVHELTNVPRAKIYDVLKVLAK
KGYLEIRQGSPTYFRAVDPKQVIGKIKDEFINCAIETLDQLNELSYELPKTSPVWCIQSE
WGIKNRIREILIGVKEELIVFSSSTEFFREFEAELKRLEKNCRLTLIVNDLERFKSLPFE
FREPTKEFSDSINNIVIDGVKYDEQFFMIADGKESIGVHSVGNKREAVVIKLPVVCYMQK
MIYDRVLEPNFIGKDLP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgccacttaatcctcagttaattcgcaatctggagaagttagggctgactgaa
aacgaggcgaaagcctatgtcggggttgtcagtctgagggaggctacagcccgggaagtc
catgaacttacgaatgtgccgagagccaaaatatatgatgtcctcaaagtgctggcaaag
aagggctatctggaaatccgtcagggttctccaacctatttccgggctgttgatcccaaa
caggtaataggcaagataaaagacgaattcatcaactgtgcgatagaaacgcttgaccag
ctcaacgagttaagttacgaacttcctaaaacttctcctgtctggtgtatccagagtgag
tggggaattaaaaacagaatccgggaaattctcatcggggtaaaggaagaactgattgtt
ttttcttccagtacggagttcttccgggaatttgaggctgaactcaaaagattggaaaaa
aactgccgtttaaccctcattgtgaatgatcttgagagatttaaatccctgccctttgag
ttcagagagcctacaaaagagttttcggactccataaataatattgttattgatggagtt
aagtatgatgaacagttctttatgattgcagacggaaaagaatcaattggagtccacagt
gtgggaaacaaaagggaagcagtcgtaatcaagctcccggttgtttgttacatgcagaag
atgatctacgacagagtgcttgagccgaattttattggaaaggatcttccttaa
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