Methanosarcina siciliae T4/M: MSSIT_0254
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Entry
MSSIT_0254 CDS
T03865
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSSIT_0254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msw02000
]
MSSIT_0254
Transporters [BR:
msw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSSIT_0254
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_29
AAA_22
IstB_IS21
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKB26973
UniProt:
A0A0E3P113
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All DBs
Position
complement(298833..299768)
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AA seq
311 aa
AA seq
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MNLLEIRDLSIDFPAGEDSVKAVSRVSFEVREGETFGIIGESGSGKSVIGLALLRLLPAN
AKVEGTVFFKGQNLFSLKPSELRKIRGKRISLMPQNPAGALNPVLKNGVQVEEVFERTER
KEGMKKALKLMKQLFLRDPERLCNLYPHQLSGGMRQRLLACMSLSFEPELLIADEPTKGL
DPEAKEGAVKLFTKIKKEYGKTMLLITHDLDLALEVCDRIAVMYAGEIVELDEASKVLGT
PLHPYTKGLIRAQPRNGLVPLSGQTPSRIKLPEGCFFHERCRYSRAECSRKHPEIRNHKG
GWIRCHFRSLQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctgcttgaaataagagacctctccatagattttcctgcaggggaagacagcgta
aaagccgtatccagggtctcttttgaggtaagagaaggagagaccttcgggattatagga
gaaagcgggtcaggaaaatccgtgatagggcttgccctgctcaggcttcttccggcaaat
gcaaaggtggaaggaaccgtcttttttaagggacagaaccttttttcccttaagccttcc
gaactccggaaaatccggggaaaacgcatctcgctcatgccccagaacccggccggagcc
ctcaaccctgtcctgaaaaacggggttcaggtggaggaggtcttcgagaggacggaaaga
aaggaaggaatgaaaaaagccctgaaactcatgaaacagctctttttgagagatcccgaa
agactctgtaacctttatcctcaccagctttccggaggcatgaggcagcggctgcttgcc
tgtatgtccctttcctttgagcccgaacttttgattgcggacgaacccacaaagggtctg
gaccctgaggcaaaagaaggagcggtgaagcttttcactaaaatcaaaaaagagtatggg
aagacaatgctcctgatcacccatgacctcgacctggctcttgaggtctgcgaccgcata
gccgtgatgtatgcaggagagattgtggagctggacgaagcttcaaaagtcctcggcaca
ccccttcacccttatacaaaagggcttatccgggctcagcccagaaacgggcttgtccct
ctgagtggacagacccccagcaggataaagcttccagagggctgttttttccatgaaagg
tgcagatattcacgagctgagtgttccaggaaacatcctgaaattagaaaccacaaagga
gggtggatcaggtgccacttccggtccttgcagtaa
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