Methanosarcina siciliae T4/M: MSSIT_0548
Help
Entry
MSSIT_0548 CDS
T03865
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSSIT_0548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msw03019
]
MSSIT_0548
03110 Chaperones and folding catalysts [BR:
msw03110
]
MSSIT_0548
03029 Mitochondrial biogenesis [BR:
msw03029
]
MSSIT_0548
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msw04147
]
MSSIT_0548
Enzymes [BR:
msw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSSIT_0548
Messenger RNA biogenesis [BR:
msw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSSIT_0548
Chaperones and folding catalysts [BR:
msw03110
]
Heat shock proteins
HSP60 / Chaperonin
MSSIT_0548
Mitochondrial biogenesis [BR:
msw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSSIT_0548
Exosome [BR:
msw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSSIT_0548
Exosomal proteins of other body fluids (saliva and urine)
MSSIT_0548
Exosomal proteins of breast cancer cells
MSSIT_0548
Exosomal proteins of colorectal cancer cells
MSSIT_0548
Exosomal proteins of bladder cancer cells
MSSIT_0548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GTP-bdg_M
Motif
Other DBs
NCBI-ProteinID:
AKB27267
UniProt:
A0A0E3P1K4
LinkDB
All DBs
Position
652702..654312
Genome browser
AA seq
536 aa
AA seq
DB search
MASKQIMFDEGARKALLTGVDKVANTVKITLGPKGRYVVLDKSTKPVVTNDGVTIAKEIE
LHDKFENMGAKLVKEVASKTQDNTGDGTTTATLLAQSMIREGLKNISAGANPIEVKKGIE
LATEKVVGYLKSKSVEVKGKDKIVQVATVSANNDEEIGNLIADAMERVGYNGVITVEDSK
TMETSLDVVEGMQFDRGFVSPYMALDTEKMTCEFEDPYILITDKKINSMKQIVPVLEKVA
SEGRSLLIIAEDVDGDAQAALILNIIRGSLRVCAVKAPGFGNERKEMLEDIAVLTGGQVI
SEEKGMKLEEFSDYMLGSARKVTVDNNKTIIVEGRGDKAKIEDRVRIIEAQVNIAEADYQ
KTGLKKRQAKLGGGVAVIKVGAATETELKEKKMRIDDALNATKAAVEEGVVTGGGVSLFR
AAAVLDDLGLEGDRQVGVKIVRRSIEDPVRQIAANAGREGAEVVATIRAESGECFGYNAK
GDVFEDLFEAGVIDPTKVVRSGLQNAASIAGMVLTTEALVTDFDEEKDDKTAAIII
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagcagataatgtttgatgagggcgcaagaaaagccctcttaaccggtgta
gataaagttgcaaatactgttaagatcaccctgggccccaaaggtcgctacgttgtgctg
gacaaaagcacaaaacccgtggtcacaaatgatggggtcaccattgcaaaagaaatagag
ctccatgacaagtttgaaaatatgggggcaaagcttgtcaaggaggttgcttccaagacc
caggacaacacaggagacgggaccactaccgctaccctccttgcccagagcatgatccgg
gaaggtctgaaaaacatcagtgccggggcaaaccctattgaggtcaagaaagggattgag
cttgcaacggaaaaggttgtggggtatctcaagagcaagagtgtggaagtcaagggcaag
gacaagatcgtacaggtagctaccgtttccgcaaacaatgacgaggaaataggcaacctg
atcgccgatgctatggaaagggtaggctacaacggggtaatcacggttgaagactcaaaa
acgatggaaaccagccttgatgtggttgaaggtatgcagtttgaccgcggctttgtttcg
ccctacatggcacttgatactgaaaaaatgacctgtgaattcgaagacccctatatcctg
attacggacaagaagatcaacagcatgaagcagatcgtgcccgtgcttgagaaggtcgct
tccgaaggccgatccctcctgattattgctgaggacgtcgacggggatgcccaggcagct
ctgatccttaacatcatccgcggatccctgagagtctgcgctgtaaaagctccggggttc
ggaaacgagagaaaggagatgctcgaagatattgccgtcctgaccggcgggcaggtaatc
agtgaagagaaaggcatgaaacttgaggaattcagtgattacatgctcgggagtgccagg
aaggttacggttgacaacaataaaaccataatcgtggaaggcaggggcgataaggcaaag
attgaggacagagtcaggatcatcgaagcccaggtcaatattgccgaagccgactatcaa
aagacaggacttaaaaagcgccaggcaaagcttggaggtggcgttgcggtaatcaaagta
ggtgctgcaactgaaaccgagctcaaggaaaagaagatgaggatcgatgatgccctgaat
gctacaaaagccgcagttgaagaaggtgtggttacgggtggaggagtcagccttttccgg
gcagctgcagtccttgatgacctcggccttgaaggcgacaggcaggtgggcgtaaagatc
gtccggaggtccatagaagatcctgtccgccagatagctgcaaacgcaggcagggaaggc
gccgaagttgtggcaaccataagggccgagtccggtgagtgcttcgggtacaatgcaaag
ggcgacgtctttgaagacctcttcgaagccggcgtaatcgacccgacaaaagtggtaaga
agcgggctccagaatgccgcctcaatcgcaggtatggtgctcacgacggaagctcttgtg
accgattttgacgaagaaaaggacgacaagacagctgcaatcattatctga
DBGET
integrated database retrieval system
