Methanosarcina siciliae T4/M: MSSIT_0813
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Entry
MSSIT_0813 CDS
T03865
Name
(GenBank) hypothetical protein
KO
K07463
archaea-specific RecJ-like exonuclease
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
MSSIT_0813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
DHH
tRNA_anti_2
S1
RMI2
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AKB27532
UniProt:
A0A0E3P285
LinkDB
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Position
981204..983270
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AA seq
688 aa
AA seq
DB search
MCKGKGKSKSVDFMKISEKDIDSFLKNGAVCEKCKGKGSIEVTRPCEACEGLGKIYTCKV
CGVRIHDPQEAENEICSSCARSQHVYALDESCDLKDVEAGKLYHGIVSSIASFGVFVDLN
PHVRGLMHSSNVGVPPEVGEAVIVLVKSIKAGGKLDLIPKTLTKYETIELEKELPLKNSS
EIDTSMKGRLIRIEGEVIQVKQTSGPTIFTISDEGGFIPCAAFESAGKRSYPHIDVGMIV
SITGEVTPRDEQVQIEVMSMKLLTGEKEAAVKFRVEKVIEEKAAPADIPFLVESAVMERL
KPRMLHVAKEIKKAIFHSTPIILRHHADADGITSAIAIERAILPLITEIGGADAEYYFYK
RAPSKAPFYELADVTRDISFALEDYARHGQKMPLVILVDNGSTEEDVPSMRQARVYGIDM
LVVDHHHPDDIVDQYLIGHANPAHVGGDFGVTAGMLCAEVARMINPGISDTIKHLPAVSA
VGDRSEAPEAERYISLVSDRYTLEELKNMALALDYEQFWLKFSSGKGIIDDILDLGDHKV
HKNLVSLLCEQANTMIKEQLETCLFNVKSHKLANGAIMNVIDVENYAQKFTFPPPGKTSG
EVHDVLCKRNPDKPVVTIGYGPDFAVIRSKGVLMNIPRIVRELHEEMKGAGVSGGGHLVV
GSIKFVEGMRTEVLSKLAEKIASTEVEH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtaagggaaaaggcaagtcaaagtcagttgatttcatgaaaatttcagaaaaagat
attgacagtttcttgaaaaatggtgcagtatgcgagaaatgcaaaggtaagggaagtatt
gaagttaccagaccctgtgaagcctgcgaagggcttggaaagatttatacctgcaaagtt
tgtggggtaagaattcatgatccgcaggaggcagagaacgagatctgcagttcctgtgca
cgttcccagcacgtttacgctctggatgaatcctgcgaccttaaagatgtggaagcagga
aaactttaccacggcatagtgagcagcatcgcttctttcggggtctttgtggacctgaac
cctcacgtgagagggcttatgcattccagtaacgttggggtccctccagaagtcggggag
gctgtaatcgtcctggtgaaaagtatcaaagccggaggaaaactggacctaatcccgaag
acgctaacaaagtacgagactatcgagcttgaaaaagagctcccacttaagaattcctcc
gaaatagataccagcatgaagggcaggctcatccggatcgaaggagaggtaatccaggtt
aagcagacaagcgggcctaccatcttcaccatcagcgatgaaggaggctttattccctgc
gcggctttcgagagtgccgggaaacggtcctatccccacatcgatgtagggatgatcgta
tcgattaccggagaggtgactccgagggacgagcaggtccagattgaagtcatgagcatg
aaactgctgaccggtgaaaaggaagctgctgtcaagttcagggtcgagaaggtgattgag
gaaaaagcagcgcctgctgatattcctttccttgtcgaaagtgccgttatggagagactc
aaacccaggatgctccatgtcgccaaggaaatcaaaaaagcaatattccattcaacaccc
attatcctcaggcaccatgccgatgctgacgggatcacttcagcaattgccattgaaaga
gcaatccttcccttgattacggaaataggtggggcagatgcggaatactatttctacaaa
cgggctccttccaaagctcctttttatgagctagcggatgttacaagggatatttccttt
gcacttgaggattatgccaggcacgggcagaagatgcctctcgtgatcctggtggacaac
ggctcaaccgaagaagacgtaccctcaatgcggcaggccagggtctacggcatagatatg
cttgtcgttgaccatcaccacccggacgacattgttgaccagtaccttatagggcacgca
aaccctgctcatgtgggaggcgacttcggggttactgcaggcatgctctgcgcggaagtc
gcccggatgattaatcccggtatcagcgataccataaagcaccttccggcggtttcggca
gtaggagaccgttctgaggctcctgaggccgaaaggtatatctcgcttgtctcggatcgt
tatacccttgaggaattgaaaaatatggcccttgctcttgattatgagcagttctggctt
aaattcagcagtggaaaggggattattgacgatatactggatctgggagaccataaagtc
cataaaaatctggtctccctgctttgcgaacaggcaaacaccatgataaaggagcagctt
gagacctgcctctttaatgtcaagtcccataaactggcaaacggcgccatcatgaatgtg
atcgatgtcgaaaactatgcccagaagtttacctttcctccaccaggcaaaacctccgga
gaagtgcacgacgtgctctgcaagagaaacccggacaagcccgtggttacaattggatac
ggtccggactttgcagtcatccgctcaaaaggtgtactgatgaacatccctcgtattgtc
agagagctccatgaggaaatgaaaggagccggagtcagcggtggtggacaccttgttgtg
ggcagcattaagtttgtagaagggatgagaaccgaggtattgtcaaagcttgccgaaaag
atagcatctacggaagttgagcattaa
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