KEGG   Methanosarcina siciliae T4/M: MSSIT_0971
Entry
MSSIT_0971        CDS       T03865                                 
Name
(GenBank) DNA-directed RNA polymerase subunit A''
  KO
K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Organism
msw  Methanosarcina siciliae T4/M
Pathway
msw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:msw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MSSIT_0971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msw03021]
    MSSIT_0971
Enzymes [BR:msw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MSSIT_0971
Transcription machinery [BR:msw03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     MSSIT_0971
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 CBP66 DUF1947
Other DBs
NCBI-ProteinID: AKB27690
UniProt: A0A0E3P530
LinkDB
Position
1187168..1188367
AA seq 399 aa
MSISEATIDSMIKDLPFPFNILNTLREDVLKAGVSKKEMEEIIEKMMEEYTASCIEPCDA
AGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKE
HPEDYAYDREKTRALAWEIEATKIDHIADVTTDLSQMKLIIDLHEKAMEGRNITIDQVKE
KFNEELNVLVNISPDIDNQIVITPGEPSYRELLQLAKSIHNVTLKGIEGIKRVVVRKEGE
EYTLYTEGSALREVLQFNGVDKTRTSTNNINEIYEVLGIEAARNAIIKEATDTLREQGLT
VDIRHIMLVADLMTCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQ
GVTENIIVGQPIRMGTGDVHLVSRRVEKVEAEELEAEEE
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgagtatcagtgaagctacaatagacagcatgataaaggacctgccatttccttttaac
atattgaacaccctgagggaagatgttctcaaagccggggtgagcaagaaggaaatggaa
gagatcatagaaaaaatgatggaagaatatactgcttcatgcatagagccctgtgacgct
gcgggcgtcgttgcagcccaatccataggggaaccgggtacccagatgacgatgcgtacc
ttccactacgccggtgtggccgagattaacgttaccctcggtcttccccgccttatcgaa
atcgtggatgcgaggaaaatcccgagcactcctatgatgacaattgccctttccaaagag
catcctgaagattacgcttacgacagagagaagacaagagctctcgcctgggagattgag
gcaaccaagatcgaccacatcgctgacgtgaccactgacctctcccagatgaagcttata
atagacctgcacgaaaaggcaatggaaggcaggaatattactatagaccaggtgaaggag
aagttcaacgaagagctgaacgtactggtcaacatttccccggatattgataaccagatc
gtcatcacccccggagagccctcttacagagaactgctccagcttgcaaaaagcatccac
aatgtaacccttaagggcatagaaggaatcaagagagtggtggtcaggaaggagggtgaa
gagtataccctctatacggaaggctcagctctgcgggaagttttgcagttcaatggtgtg
gacaagaccagaaccagcacaaacaacatcaatgaaatctacgaagtgcttggaatcgaa
gctgcaagaaatgccattatcaaggaagcaacggataccctgcgtgaacagggtctgact
gtggacatcaggcacataatgcttgtggcagacctcatgacctgtgacggagaagtaaag
cagatcggtaggcatggaatttcaggtgaaaaggccagtgtatttgcccgtgcagctttc
gaagttactgtcaaccacctcctggacgcaggtatgcgcggagatgtggatcagcttcag
ggtgttacggaaaacatcattgtcggtcagcctattcgcatgggtacgggtgatgtgcac
ctggtcagcagaagagttgaaaaagttgaagctgaagagcttgaagcagaagaagaataa

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