Methanosarcina siciliae T4/M: MSSIT_0977
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Entry
MSSIT_0977 CDS
T03865
Name
(GenBank) Translation elongation factor 1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSSIT_0977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msw03019
]
MSSIT_0977
03016 Transfer RNA biogenesis [BR:
msw03016
]
MSSIT_0977
03012 Translation factors [BR:
msw03012
]
MSSIT_0977
04131 Membrane trafficking [BR:
msw04131
]
MSSIT_0977
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msw04147
]
MSSIT_0977
Messenger RNA biogenesis [BR:
msw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MSSIT_0977
Transfer RNA biogenesis [BR:
msw03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MSSIT_0977
Translation factors [BR:
msw03012
]
Eukaryotic type
Elongation factors
MSSIT_0977
Membrane trafficking [BR:
msw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MSSIT_0977
Exosome [BR:
msw04147
]
Exosomal proteins
Proteins found in most exosomes
MSSIT_0977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
RsgA_GTPase
cobW
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AKB27696
UniProt:
A0A0E3L808
LinkDB
All DBs
Position
1193060..1194328
Genome browser
AA seq
422 aa
AA seq
DB search
MAADKPHMNLAVIGHIDHGKSTLVGRLMYEAGAVPAHIIEKYKEEAKQKGKESFAFAWVM
DSLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPD
GVMAQTKEHIFLSRTLGISQLIIAINKMDAVDYSEAKYKEVVEQVSGLLKMIGFKPADIP
FIPTSAFMGDNITKLSEKTPWYKGPVIMQALDELKEPEKPSTLPLRIPVEDAYTISGIGT
VPVGRVETGVMKKGDKVVFMPGGAGGEVKSIEMHHEEIPQAYPGDNIGWNVRGIGKNDVR
RGDVCGHTDNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPK
TGQVKEENPTFIKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVK
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagacaaaccgcacatgaatttagcagtgatcggtcacattgaccacggaaag
tcaacccttgtaggacgcttaatgtacgaagccggagcagtaccggctcacattatcgag
aagtataaggaagaagcaaagcagaagggtaaggaatccttcgctttcgcatgggttatg
gactcccttaaggaagagcgtgaaagaggtatcacaattgatatcgctcacaagagattt
gacacacccaaatattactttacagtcgtggactgtccgggccaccgtgactttgtcaag
aacatgatcacaggtgcttcacaggcagacgcagcaatcctcgtcgttgcagcccctgac
ggtgtcatggcccagaccaaggaacatatcttcctttcaaggaccctcggtatcagccag
ctgatcatcgcaatcaacaagatggacgcagtcgattacagcgaagcaaagtacaaggaa
gttgtagaacaggtatccggcctccttaagatgatcgggttcaagccagccgatatcccc
tttattcctacctctgcatttatgggagacaacatcaccaagctcagtgaaaagactccc
tggtacaagggtcccgtaatcatgcaggctctcgatgaactcaaggaaccggaaaaacca
tccactctccctctcaggatccctgtcgaagacgcatacaccatctcaggtatcggaact
gtccctgtaggcagagttgaaaccggtgtaatgaagaagggtgacaaagtagtcttcatg
cccggcggagccggcggtgaagttaagtccattgaaatgcaccacgaagaaattccacag
gcctaccccggagacaacatcgggtggaacgtccgcggtatcggcaagaacgacgtccgc
agaggtgacgtctgtggccatactgacaacccgccaaaggttgctgacgaattcgtaggg
cagattgtggttctccagcacccctccgcaatcactgcagggtacacacctgtcttccac
gctcacacctcccagatcgcatgccagctgatcgagcttaacaagaagctggacccgaag
accgggcaggttaaggaagaaaacccgaccttcattaaggccggagatgcagcaattgta
accatcaaaccgacaaaaccgatggttatcgagcccgtaaaagaaattccacagctcggc
agatttgctatccgtgatatgggtatgacaattgccgcaggcatgtgcatgagtgttaag
cagaaataa
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