Methanosarcina siciliae T4/M: MSSIT_1001
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Entry
MSSIT_1001 CDS
T03865
Name
(GenBank) DNA repair and recombination protein RadA
KO
K04483
DNA repair protein RadA
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msw03400
]
MSSIT_1001
DNA repair and recombination proteins [BR:
msw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSSIT_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_5
RecA
AAA_25
ATPase
HHH_2
HHH
AAA_22
DNA_pol_lambd_f
Cdd1
IMS_HHH_1
AAA_24
NACHT
SAM_BAF
IMS_HHH
DUF4332
DnaB_C
ATP-synt_ab
ATPase_2
TsaE
AAA_18
TrwB_AAD_bind
PhoH
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AKB27720
UniProt:
A0A0E3P2J3
LinkDB
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Position
complement(1216957..1217934)
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AA seq
325 aa
AA seq
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MSEIKLEELAGVGPATAEKLKEAGFNTVEAVAVASPSELANTAEIGESTAAKIINAARQA
ADIGGFETGDLVLERRKLVGKLTTGCVEFDEMMGGGIETQSITELYGEFGSGKTQVAHQL
AVNVQMDREHGGLDGSVIIIDTENTFRPERITQMVKGLSEKYGMELDPEEFLQNIHVARA
YNSNHQILLVDSATDLANELKEMGKPVRLLIVDSLMAHFRAEYVGRGTLADRQQKLNKHM
HGLLRFGDLFNACVVVTNQVMAKPDAFFGDPTRPVGGHVVGHTATFRLYLRKSKGEKRII
RLVDSPSLPEGEAVVAVTTAGLTDQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatcaaacttgaagaactggcaggagttggtcctgcaaccgcagaaaaactc
aaagaagccggatttaataccgttgaagccgtggccgtagcctctccttcagaacttgca
aacacagccgaaataggggaatcgactgctgcaaaaattatcaatgctgcaaggcaggct
gctgatatcggaggatttgagaccggagatctcgtccttgaaagaaggaaattggtaggc
aaacttaccaccggttgtgttgaatttgacgaaatgatgggtgggggtatagaaacccag
tctatcaccgaactgtacggagaattcggttccggaaagacccaggtggcccaccagctt
gcagtgaatgtccagatggacagagagcatgggggtctcgatggttccgtcattataatc
gatactgaaaacaccttcaggccggaaaggataacccagatggtaaaggggctttccgag
aagtacggaatggaactcgaccctgaagaattcctgcagaacatccatgttgcgcgggca
tacaattccaatcatcagatcctccttgtggattctgcaacagacctggcaaacgagctc
aaagaaatgggaaaacccgttcgtctcctgatcgttgattctcttatggctcacttcagg
gccgaatatgtaggacggggaacccttgcagacaggcagcaaaagctaaacaagcatatg
cacggcttgctccgcttcggagacctgttcaatgcctgcgtggttgttacaaatcaggtc
atggcaaaacccgatgccttctttggggaccccacaaggcccgtcggaggacatgtcgtg
gggcacactgcaaccttcagactctacctgcggaagtccaaaggggaaaagagaattatc
cgtctcgtggactctcccagtctcccggaaggagaagctgttgttgcagtcaccacagcc
gggcttaccgaccagtaa
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