Methanosarcina siciliae T4/M: MSSIT_1012
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Entry
MSSIT_1012 CDS
T03865
Name
(GenBank) Chitin binding protein
Organism
msw
Methanosarcina siciliae T4/M
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_5
PKD_4
PKD
LRR_8
PKD_3
DUF7076
Motif
Other DBs
NCBI-ProteinID:
AKB27731
UniProt:
A0A0E3L815
LinkDB
All DBs
Position
complement(1227346..1231821)
Genome browser
AA seq
1491 aa
AA seq
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MLNGSVDLNSINYVRIVDIPGSGDFKDSQGNPIYDAWVTWGSGGLDLEAVGVINIGVVSA
PVANFTADVTSGIAPLTVQFYDESTGVIILDYAWDFDNDGIVDSTLQNPSFTYEAAGTYN
VSLTVSNTGGSSTETKADYIVSVLPDSPVADFSVDVTSGPAPLTVQFTDLTTNGPISWAW
DFESDGIIDSYEQNPSWTYNAAGNYTVTMTAANLVASDTVTRVNLTSVENLPPMADFSAD
PVATLIGCSVQFTDLSTNSPTSWQWDFDNDGTIDSTMQNPSYTYTTAGTYTVNLTVSNPA
GSGDEVKSDYITVKEQASPASDFTYTSDGSSITITKYIGSDDIVLIPAEIEGLPVTTIGT
SAFYGCSALTTVTIPDSVTTIGTSAFQVCSALTTVSIPDSITTIGTSAFQDCSALTTVTI
GSGVTTIGTSAFQDCSALTTVTIGSGVTTIGTSAFQDCSALTTVTIPDSVTTIGDSAFCG
CSGLTIVTIGSGVASIGGVTSSSSFVFSDCSALISIDVDADNSVYTSIDGILYSKDATTL
IRCPLGKTGSISVPDCVTTIERVAFYGCTGLTSVTIPDSVTSIGTYAFTACSALTAIDVD
TDNSVYASIDGILYNKDITTLILCPSGKTGSVSIPDSVTSIDVSAFSGCTGLTSVTIPDG
VTSIGTYAFYGCSGLATVTIPDSVTSIDASAFRGCTALASVTIGNNVTSIGYYAFRDCSG
LTTVTIPDSVTSIPSYAFSGCSGLTAVTIGSGVTSIGENAFSGCSALAAIDVDTDNSVYA
SIDGILYNKAITTLIQCPSGQTGSVTIPDSVTSIGRLAFLDCSAPIVMVFEGNAPTVATY
WNYNCPNIAVYYYEGATGFTTPLWNGVPCYPALVAATGNFSSNIVYGSAPLTVEFTYTGV
GANTFAWDFDNNGTVDSTMKNPSYTYDVPGTYSVRLNVSNPWGSNSEVKTDYITIVEPVD
NFTYISDGTSVTITGYIGSGGDIVIPSTIKGMPVTTIGASAFKSNTNITSATIPDSVTSI
SDYAFLSCSGLTTVTIGSGVTTIGDSAFYGCTSLTSVTIGNNVTTIGTYAFRGCTALTSV
TIPDSVTTIGTYAFYGCTYLTSVTIGNNVTSVGSSAFQDCSALTSVTIPNSVTSIGSSMF
RDCTALTSVMFTGNAPDSVSSSWASGCPDLVVYYYEGATGFTTPMWNGVACYPLAVAPVA
DFEADVTSGIGPLIVNFTDLSTRSPDTWEWDFDNDGTVDSTEQNPSYTYVSAGTYTVNLT
VANANGTDSELKTDYIEVSEYSGSTFTLSFDPESSSVAENESTEVNIVASNFPAGFSGYN
LTIAFDDPAVAEIIYIEYPSWALITENSSLPGTSIYLKAVDGEDAVQAGEADVVLATLTI
SGKEAGYANLSVGVSRLDDDSGETIEPSLLTGKIEVTLLSPLPDQEYAPKDLDGDGLYED
LTGNGEFSFVDIVAYFHNMDWIEENMPVEYFDFNANGRIDFDDVVDMFAMI
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatgggagtgtggaccttaactccatcaactacgtccgcattgtggatatcccg
ggcagcggggacttcaaggactcccagggcaaccccatctatgatgcctgggtgacctgg
ggttcaggcggattagacctggaggcggttggcgtcatcaacattggtgtggttagtgca
ccagtggctaacttcaccgccgatgtgacctccgggatcgcaccgcttacggtacagttc
tatgatgagagcactggtgtaataatacttgactatgcctgggatttcgataacgatggg
attgtggactcaactttacagaacccctcgttcacctacgaggctgccggcacatacaac
gtctcattgacggtatccaacaccggcggatcgagcaccgaaaccaaggccgattacatc
gtctccgtcctgccggactcaccggtagccgatttctccgttgatgtgaccagcggcccc
gctccgctgaccgtgcagttcactgaccttaccaccaacggaccgatcagctgggcctgg
gacttcgagtccgatggcataatcgactcgtacgagcagaatccctcctggacatataat
gccgctggtaactatacagtgactatgactgccgctaacctggtggcttcggatactgtc
accagggtcaatctgacctcagtggaaaatttgcctccgatggctgatttctcagctgat
ccggtggccactttaataggatgcagcgtgcagttcactgacctgtctacgaactctccg
acctcctggcagtgggacttcgacaatgacggtacaattgacagtacgatgcagaatccg
agctacacatatacgaccgcgggaacatacaccgttaatctgacggtgagcaaccctgca
ggaagcggtgacgaagttaagagcgactacatcaccgtgaaagagcaggcctctcctgcc
agtgattttacctataccagtgacggcagctctatcaccatcactaaatacatagggtcg
gatgatattgtcctcatacccgcggagatcgagggactgcctgttactactatcggcacc
agcgcgttttacggctgctctgccctgacaactgtaaccatcccggacagcgtcacaacc
atcggcaccagtgcgttccaggtttgctccgctctgacaacggtgagcatcccggacagc
atcacaaccatcggcaccagcgcgttccaggattgctccgctctgaccacagtgacaatc
ggtagcggcgtcactaccatcggcaccagcgcgttccaggattgctccgctctgaccaca
gtgacaatcggtagcggcgtcactaccatcggcaccagcgcgttccaggattgctccgct
ctgacaactgtaaccatcccggacagcgtcaccaccatcggcgacagcgcgttctgcggc
tgctccggactgacaatagttaccatcggcagcggggttgcgagcatcggcggggttacg
agcagcagcagttttgtgttctctgattgctctgctctgatttctatcgatgttgatgcc
gataacagtgtgtacactagcatcgacggaatcttgtacagcaaagacgccacaacttta
atacgatgtccgttaggaaagaccggttccatatccgtgccggactgcgtcaccacaatc
gaaagggttgcgttctatggttgcaccggtcttacctctgtgactattccggacagtgtc
accagcatcggcacctatgcgttcactgcttgctctgctctgactgcaatcgatgtcgat
accgataacagtgtgtacgccagcatcgacggaatcctgtacaacaaggacatcacaact
ttgatactatgtccgtcaggaaaaaccggttctgtatccatcccggacagcgtcaccagc
attgatgtctctgcgttctctggctgcaccggtcttacctctgtgaccattccggacggt
gtcaccagcatcggcacctatgcgttctacggctgctccggactggcaactgtaaccatc
ccggacagcgtcaccagcattgatgccagtgcgttccgtggctgcaccgcccttgcctct
gtgaccatcggaaacaatgtaaccagcatcggctactatgcgttccgcgactgctctgga
ctgacaacagtgaccatcccggacagcgtcaccagcatcccaagctatgcgttcagtggc
tgctctggactgacagcagtaaccatcggcagcggagtcaccagcataggtgagaatgcg
ttctctggttgctctgctctggccgcaatcgatgtcgataccgataacagtgtgtacgcc
agcatcgatggtatcctgtacaacaaggccatcacaacgctgatacaatgtccctctgga
cagacaggttctgtaaccataccggacagcgtcaccagtatcgggagacttgcgttcctc
gactgcagtgccccgattgtcatggtgttcgagggcaacgcgccgacggtagccacgtac
tggaattataattgccctaatatagcagtctactactacgaaggggctaccggcttcaca
accccgctgtggaatggtgttccgtgctaccctgctctcgtcgccgcgaccggcaatttc
agctcgaacatcgtctatggcagcgcaccgctcacggtagagttcacctatacgggtgtg
ggagcgaacacgttcgcctgggacttcgacaataacggtacggtggacagcacgatgaag
aaccccagttacacctacgatgtgccgggtacatattcggtcaggctgaatgtcagcaac
ccctggggcagcaacagtgaggtcaagaccgactacatcaccatagtcgaaccggtcgat
aactttacctatatctccgacggcacctcggtgaccataaccggttacattggttcgggc
ggtgatatcgtcataccgagcacgatcaagggcatgcctgtcaccaccatcggcgccagt
gcgtttaagagcaataccaacatcacctcggcgaccatcccggacagcgttaccagcata
agtgactacgcgtttctaagttgctccggactgacaacagtgactatcggcagcggagtc
accaccatcggcgacagcgcgttctacggctgcacctccctgacttctgtgaccatcgga
aacaatgtcaccaccatcggcacctatgcgttccgcggctgcaccgcccttacttcggtg
accatcccggacagcgtcaccaccatcggcacctatgcgttctatggctgcacctatctt
acctcggtgaccatcggaaacaatgtcaccagcgtcggcagtagtgcgtttcaggactgc
agcgctctgacatcggtaaccatcccgaacagtgtcaccagcatcggcagcagtatgttc
cgcgactgcaccgcccttacctctgtgatgttcacgggcaatgctcctgattctgtgagc
agcagctgggcgtctggatgtcccgacctggtggtgtactactacgaaggtgccaccggc
ttcaccacaccgatgtggaacggcgtcgcctgttacccgctggcagtggcaccggtggcg
gacttcgaagccgacgtgacatcaggaatcggacctctgattgtgaatttcaccgacctg
tccaccagatctccggatacctgggaatgggactttgataacgacggaactgtggattct
actgagcagaacccctcgtatacatatgtttcagccggcacttacactgtcaaccttacg
gttgcgaatgcaaacggtaccgattccgagctaaagactgattacatcgaagtttctgag
tattcggggtcaacgtttactctctctttcgaccctgaaagttcctcagttgcagaaaac
gaatctactgaagtaaatatcgttgccagtaatttccctgcagggttctcaggctacaac
ctgaccattgcttttgacgacccggctgttgccgagataatctacatcgagtatccctca
tgggctctgattactgaaaactcttccctgcccgggacttctatctacctgaaggctgtt
gacggagaagatgccgtacaggcaggagaggcagatgttgtgcttgcaactctcacgatt
tcgggaaaagaagcaggatatgctaacctttctgtaggagtttcccgtctggatgacgat
tcaggagaaactatagaaccatcccttttaacagggaaaatcgaagtgactcttctgtcg
cccctgcctgatcaggaatatgctcctaaggaccttgacggggacgggctttatgaagac
ctcaccggaaacggggagttcagtttcgtggatatagtggcttacttccacaacatggac
tggatagaggaaaacatgccagtggagtatttcgacttcaacgcaaacggaaggatagac
tttgatgatgtagtggatatgtttgcaatgatataa
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