Methanosarcina siciliae T4/M: MSSIT_1091
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Entry
MSSIT_1091 CDS
T03865
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSSIT_1091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msw03019
]
MSSIT_1091
03009 Ribosome biogenesis [BR:
msw03009
]
MSSIT_1091
04131 Membrane trafficking [BR:
msw04131
]
MSSIT_1091
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msw04147
]
MSSIT_1091
Messenger RNA biogenesis [BR:
msw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSSIT_1091
Ribosome biogenesis [BR:
msw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSSIT_1091
Membrane trafficking [BR:
msw04131
]
SNARE
SNARE associated proteins
Others
MSSIT_1091
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSSIT_1091
Exosome [BR:
msw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSSIT_1091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_5
CDC48_2
AAA_16
AAA_22
TIP49
AAA_14
AAA_2
AAA_25
IstB_IS21
AAA_33
AAA_28
nSTAND3
AAA_7
RNA_helicase
Mg_chelatase
Sigma54_activat
AAA_18
Parvo_NS1
ATPase
NPHP3_N
Zeta_toxin
AAA_17
ABC_tran
AAA_24
DUF5906
PhoH
SLFN-g3_helicase
AAA_19
TsaE
NB-ARC
DUF815
bpMoxR
Vps4_C
ATPase_2
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
AKB27810
UniProt:
A0A0E3P2V5
LinkDB
All DBs
Position
complement(1334629..1336995)
Genome browser
AA seq
788 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWE
QGIVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEII
KRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITEATIIELR
KKPVQGYEKATRGVTTYEDIGGLGQEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIEKDDEITQAEPEIEGEIATETGAETEVEIDEAAIER
EKKEKTNLYLMYLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLERETIPSDRLEKIV
VTKKNFEDALMEAEPSALREIFVEMPSVGWDGVGGLDEAKYAIIEAVEWPIKNPEKFVKM
GIKAPKGILLYGPPGTGKTLIAQAVARESNANFISVKGPEMFSKWLGESEKAIREIFKKA
RQVSPCVVFFDEIDSIAAMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAATNRPN
LLDPAIMRPGRFDRLVYVGAPDRKGRIKIFKIHTKNTPLAEDVDLENLANITEGYVGADI
EAVCREAVMFALRENFDVEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQRPAE
TAGYVGYR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttaaaggttgaaaaggcataccctatcgaccttggaagaggaatt
atccggcttgaccctacagcgctactgaaacttcaactctctcccggcgacattgtagaa
atcagggggaagaaaaagaccacggcaaaggtatggagagcagaccggcaggattgggaa
cagggaatagtgcgcattgataatttcatccggcagaacgccggagtttccatcggggag
aaggtgaccattaaaaaggtcgaagccccggaagcaaaaaagctcattctggcgcttccg
gaaagcatgactcagggagggcccgaactgcagtttggggaacatgcgaatgagatcata
aagcggcatatcctgaaaaggcctgtgttcaagggagacataattccgattattaattcg
atgtctcagcccatgaccgagtccctgacaacaagccaggtaattcccctggttgctgtt
gagacagacccggcaaataccattgtcctgataacggaagccacaattattgagctccgg
aaaaagccggtacagggctacgaaaaagcaaccagaggcgtcaccacttatgaagacata
ggagggcttggccaggagatcatgcgtgtccgggaaatgatagagatgccgatgaaacac
ccggagctctttgcccacctcaatatagagcctccgaagggagttatcctctatggccca
cccggaaccggaaagactttgatcgcaaaagccgtggcaaatgaatcgggagcaagtttc
cattacattgcaggacccgaaatcgttgggaagttctacggggaaagcgaggaaaggctg
aggaagatcttcgaagaagcaactcaggacgccccttcggttattttcattgatgagatc
gactccattgccccaaaaagggaaaacgtgacaggagaagtggaaaggcgtgttgttgcc
cagctccttaccctccttgacgggatggaagaaagaggacaggttgtggttataggtgct
accaaccgtgtggatgcaatcgaccccgcactcaggagaccggggcgttttgacagggaa
atccatataggagtgccggataccaaggacaggtacgagatcctgcagatccacacccgg
ggcatgccaatcgagaaagacgatgaaatcacgcaagcggagcccgagattgaaggtgag
atagcaaccgagacaggggcggaaaccgaagttgaaattgacgaagctgccatagaaagg
gaaaagaaagaaaagacaaacctctacctcatgtatctggctgagaggacgcagggtttt
gtgggggcagaccttctggctctcgtgcaggaagcggcaatgcgctgcctcagggaaaac
ctgcctgaccttgacctcgaaagagaaacaattccttccgaccggctggaaaaaattgtt
gtcaccaagaagaacttcgaagatgccctgatggaagccgaaccttcggccctgagagag
atctttgttgagatgccttcggttggctgggacggcgtgggaggcctggatgaagcaaag
tatgcgatcatcgaagctgtcgaatggcctattaaaaatccggaaaaatttgtcaagatg
ggtataaaagctccgaagggaatactgctttacggcccgcccgggacgggaaagaccctg
atagcccaggctgttgccagagagtcaaatgccaacttcataagcgtcaaaggaccggag
atgttttcgaagtggctcggagagtcggaaaaagcaataagggaaatcttcaagaaagca
aggcaggtctctccctgtgttgtcttctttgatgagatcgactccattgccgccatgcag
ggcatggaatccacggacagccggacttccgaaagggtgctaaaccagctgctgaccgaa
atggacgggcttgaaaccctcaaagacgtggtaattattgccgcaactaaccgtcctaac
ctgcttgaccctgcaatcatgcgccccggacgctttgacaggctggtttacgttggggcg
cccgaccgtaaaggcaggattaagatctttaagattcacacaaagaataccccgcttgcg
gaggacgtggaccttgaaaaccttgccaatataacggaaggatacgtgggtgctgacata
gaagcagtatgcagagaggctgtaatgtttgccctcagagagaacttcgatgttgaagca
attgagatgaggcacttcagagaagccctcaagaaagtaaaacccacaatcaacgaaaac
attgcacagttctatgagaagatagaggaacagtttaagggaggccagaggcccgcagag
acagccggatatgtgggatacaggtaa
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