Methanosarcina siciliae T4/M: MSSIT_1112
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Entry
MSSIT_1112 CDS
T03865
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msw03400
]
MSSIT_1112
Enzymes [BR:
msw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSSIT_1112
DNA repair and recombination proteins [BR:
msw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSSIT_1112
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
ResIII
Helicase_C
DEXQc_Suv3
HTH_61
DNA_pol_lambd_f
HHH_2
IMS_HHH_1
Cdd1
DUF6079
Motif
Other DBs
NCBI-ProteinID:
AKB27831
UniProt:
A0A0E3L835
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Position
1359946..1362138
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AA seq
730 aa
AA seq
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MKIESLDLPDEVKRFYENSGIPELYPPQAEAVEKGLLEGKNLLAAVPTASGKTLLAELAM
LKSVLAGGKALYIVPLRALASEKYRRFQEFSELGVKVGISTGDYDRRDEGLGINDIIVAT
SEKTDSLLRNDTAWMPEISVVVADEVHLIDSADRGPTLEVTLAKLRKMNPSCQILALSAT
VGNADELAAWLDAELVLSEWRPTDLMEGVFFNGTFFCKDKEKPVEQPTKDEAINLVLDTL
GEGGQCLVFESSRKNCMGFAKKATSAVKKTLSAEDKEKLSGIADGILENSETDTASVLAS
CVRAGTAFHHAGLTSPLRELVETGFREGYIKLISSTPTLAAGLNLPARRVIIRSYRRYSS
DSGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLLAKSYEELVFLFEKYIEAGAEDIWSKLG
TENALRTHVLSTISNGFARTKEELMDFLEATFFAYQYSNFGLSMVVDECLNFLRQEEMLE
QDSDALIPTMFGKLVSRLYIDPLSAALIAKGLREAGTLTGLTLLHLVCSTPDMRLMYMRS
HDYQDINDFVMAHTEEFSKVPNPFNIVEYEWFLSEVKTALLLMDWIREKPENEICLKFGT
GEGDIRTTADIAEWIMHVTAQLARLLDLKGAKEAAELEKRIHYGAGPELMDLLDIRGIGR
VRARKLYGAGFKSTADLAGASPEKVAALVGPKIAERIFRQIGRREAVPEISDSETFEKSS
QDRQKTISDF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaagtctcgacctgcccgatgaagtaaagcgcttttatgaaaactccggg
attcctgaactttatcctcctcaggcggaagctgttgaaaaggggctgcttgaggggaaa
aacctgcttgctgcagtcccaacggcttcagggaagactttgcttgcagagcttgcaatg
ctgaaatccgtgcttgcggggggaaaagccctttatatcgtgcccctacgagccctggct
tccgaaaagtacaggcgttttcaggagttttccgaactgggggtaaaggtcgggatctcg
acaggagactatgacaggcgggacgaagggctcggcataaacgacataatcgtagccacg
tcggaaaaaaccgattccctgctcaggaacgatactgcctggatgccggagatctcggtt
gttgtggccgatgaagtccatcttatcgattctgcggaccggggccccacccttgaggtc
accctggcaaagctccgaaaaatgaacccttcctgccagatccttgctctttcggcaact
gtggggaatgccgatgaacttgcagcctggcttgacgccgaacttgtgctaagcgaatgg
aggcccactgaccttatggaaggggtattttttaacgggacatttttctgcaaggataaa
gaaaagcctgttgaacagccaacaaaagacgaagccataaaccttgtactcgataccctg
ggggaaggcggtcagtgtcttgttttcgaaagcagtcggaaaaactgcatgggttttgca
aagaaggcgacttctgcagttaaaaagactctttctgcagaagacaaagaaaagctttcg
gggattgctgacgggatcctggaaaacagtgaaaccgatactgcctcggttcttgcatcc
tgtgtccgtgcagggacagcttttcaccatgcgggccttacttctcctttgagagaactc
gtagaaaccggcttccgggaagggtacataaaactgatctcaagtaccccgacccttgca
gcagggctgaacctacctgccaggcgtgtaattatacggagttaccggcgctattcttcg
gattcaggtatgcagcccatcccggtgctcgaatacaagcagatggcaggaagagccgga
aggccgaggcttgacccctacggagaagctgtactgctggcaaagtcctatgaggaactt
gtattcctttttgagaaatatatcgaagccggagccgaagatatctggtccaaactcgga
acggaaaatgccctgaggacacacgtgctctccacgatttcgaacgggtttgcccggaca
aaggaagagcttatggattttctggaagctactttttttgcgtaccagtactcaaacttc
gggctctccatggttgtggacgagtgcctgaactttttacggcaggaagagatgcttgag
caggattccgatgcattaattcccacaatgttcggaaaacttgtttccaggctctacatt
gaccctctttcagcagccctcattgcaaagggcttaagagaagccgggaccctgaccggg
ttaactcttcttcacctggtctgcagtacacccgatatgcgcctgatgtatatgcggagc
catgactatcaggatatcaatgatttcgtaatggcacacacagaagagttctcaaaggtt
ccgaaccccttcaatattgttgaatatgagtggttcctgagcgaggtaaagacggctctt
ttgctgatggactggatccgtgagaaacctgaaaacgagatatgtttaaaattcggtaca
ggggaaggagacatccgtacaactgcagacattgccgagtggatcatgcacgtgaccgcc
cagcttgcccgcctccttgacctcaaaggagcaaaagaagctgcagaacttgaaaagcgc
attcattacggagcaggcccggaactgatggacctgctcgatatcaggggcatcggccgt
gtaagggcaaggaaactttatggggcaggtttcaaatccacagcagacctcgcaggggcc
tctcctgaaaaagtagctgcccttgttggcccgaagattgctgagaggatcttcaggcag
attgggagaagagaagcagttcctgagatctctgattctgagacctttgaaaaaagttcc
caggacaggcagaaaacgatcagcgatttttga
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