Methanosarcina siciliae T4/M: MSSIT_1251
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Entry
MSSIT_1251 CDS
T03865
Name
(GenBank) hypothetical protein
Organism
msw
Methanosarcina siciliae T4/M
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_8
TPR_19
TPR_17
TPR_14
TPR_11
TPR_9
TPR_6
ANAPC3
TPR_12
TPR_CcmH_CycH
TPR_Psidin_N
CFAP70_TPR_C
Fis1_TPR_C
CFAP70_mid_TPR
TPR_7
ARM_TT21_5th
NatA_aux_su
PPTA
ARM_TT21_N
TPR_Slam
T7SS_EccA1_N
TTC22_N
RMD1-3
ARM_TT21_C
TPR_10
SRP_TPR_like
BTAD
TPR_20
TPR-S
HEAT_Nup120
Coatomer_E
TPR_15
TPR_YpiA_C
PknG_TPR
IFT56
Paf67
ARM_TT21_2nd
TPR_BSK1_C
YfiO
DUF3856
DUF7017
Csm6_6H
TPR_P4H
ARM_TT21_4th
FAT
PRP6_TPR
ChAPs
HIR3_bundle
DUF5588
PPR_3
Motif
Other DBs
NCBI-ProteinID:
AKB27970
UniProt:
A0A0E3P380
LinkDB
All DBs
Position
complement(1531278..1536968)
Genome browser
AA seq
1896 aa
AA seq
DB search
MSLQDYTTKKGIGGIIITNDEAFQRGLDLVKRKKYEKAINTFNKILDKDPGHKEALFYRG
LALLETEKTQEALDSFNKVLQLQPGNSDALYRKGTCLAALGRFEEALETYENVLESAPDA
PEIWYMMGLAFAEIDRAEASILCFEKALELKPAYTDAWCAMGTVAGKTERYEEALEDFER
ALEISPGNTEAWYAKGLILSRLEKYENALECFDFLIRESPKDTAALEQKCLLLANLGKKE
EALEALEDFLKKFPANEASLYHKGILLSELSRYEEAEKTFSKVLKLNPGHSEAWFRKGFA
LVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALETFDAMLETYPDMEE
IWYNRALALLKLQDLLEAARSFARVTELDPGNTDARFQQGCLLARAGKYEEALETFDRLL
ESHPDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPEDYNMWLQKGLLLLDSRKFETA
LEAFENATDLKPDDEICWMNRGFALYSLERYEEALEAFREGLRLNPYLEKGWNKKGIVLG
KLGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEKAFAEVLKTNPENLDSL
YNRGISLLRLGRNEEALEYLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFEKLAAK
NPEELEIQCRKGKLAMELGKHETALQAFEKVLLKKPGSKEAWYRKGLALLNLERFEAAVK
AFDEVIVRNTTNDPSYEDAGTLKGFSQMKLGNFLPALETFESVLEKNPDSGITWYYKGLT
LQNLQRQEEAARAFESALRLNPELSDALEYRAICLFETGQYETALNAFEALLEKDPENLS
ALNSRAICFLELERHKEAVDALSKLLEINPDMEETKSRLDEAKFKLGIEYFKLGQYDEAL
ALFDGIKEETRAISGKASREANGEASEDSQKDSPLYWKGLVFIRQEAYEKALEVFSKLTG
KDPKFADGWYFIGLSCSKLGKHEEASKALKKVLEIDPAFRNLQDTYYLLGISCFELENFE
EALQTFEEALSTAPENSERNPDEAQDIMYKKSLSLLRLGRYAEAESGFKEVLALDPANSE
GLAHLSTACFKQGNYKEALEIFERVLSQNPARKTILFRKGLALKIFGKKHEALEAFDLVL
KLKPDCTYALDQRGYTLFELEKYEEAVEAFEAALEYSPKKADMQYLRALALFRIGNFKEA
LQEFEKAFDLGCRKSEIHYYTGLSCFENGDYEGAIKAFDIVLGAGLKEPEILQKRALALF
ELGKAEEAVSAVNSLLEFSAENLNGEISKDLPEGTGEENRDTGDTEEAPQVVEAQQTAGT
PQVNPELLEKFASAQIELGNYEEALLPLEKLIRESLASKKTFYSAGIALMGLGRQEEAFE
VFSEILEVYPDFKKAWYGKGLVLFSQERYEEALEAFEQAVMESPYEVAKIEESEIEESEI
EESEIEESEIEESEIGESKISDPELEDAWTKIGLVQLKTRRYEDAFETFERILEKNQTDA
NVWYLCGLVVRGLDQNEEAVEVFEKALELNPALTAALEQKGLALLSLCRYEEARDAFGSA
LARNPENTDILYNRAVASYKLLDFEEASKDFEKLLLFAPDFPDYTRACYMLGIASIELQD
YERALQALALVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLG
LCLLELEDLNEALKAFEKAALFNSKNEEALYNAATTLIKLNRVQESLGYFDRILEIAPEN
YDAMNYKGVAFCMLEQYREALRAFDNVLKKDPKNIKAVYNVGVVCFKQKLYETAARAFKE
ALTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKILRINPQDPQSMNYRGVLLGKLERYG
EAIKAFDEILSIYPDMADAKEKLEVLKSLENEEESY
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcaggattataccacgaaaaaagggatcggaggaattattatcactaacgat
gaagcctttcaaagaggccttgacctggttaaacgcaaaaagtacgaaaaagccataaac
acattcaataaaattctggataaagatccgggccataaggaagcccttttctacagggga
cttgcccttcttgaaaccgaaaaaacccaggaagccctcgattcctttaataaagtcctg
cagcttcaacctggaaactccgacgccctctacagaaagggaacctgtcttgccgctctc
ggaagatttgaagaagccctggaaacatatgaaaatgtccttgaaagtgccccggatgcc
cctgaaatctggtatatgatggggcttgcttttgccgagatagatagagctgaagcttca
atcctctgttttgaaaaagccctggaactcaagcccgcgtatacagacgcctggtgtgca
atgggaacagtagcaggaaaaaccgaaagatacgaagaagccctggaagattttgagcgg
gcacttgaaataagccccggaaatacggaagcctggtatgcaaagggcctgattctttcc
aggcttgaaaaatacgaaaatgcactcgaatgttttgattttcttatccgggaaagcccg
aaagatactgcggcccttgaacagaaatgcctcctccttgcaaacctcgggaagaaagaa
gaggctctggaagccctcgaggactttttaaagaaatttcctgcaaatgaagcttccctc
taccataaaggcatccttttaagcgaactttcaagatatgaggaagctgaaaaaaccttt
tcaaaagtattgaagctaaaccccggacacagcgaagcctggttcaggaaagggttcgcc
cttgtacagctgctcaggcttaatgaagcgatagaagcttttgacgaagccatcaggctc
gaccctgcctattttgaagcctggaattacaagtgctttgccctgatgaaacttgaggtc
tatgaagaagccctggaaaccttcgatgccatgctcgaaacctatcccgacatggaggag
atctggtacaaccgggcacttgctcttctgaaacttcaggaccttctggaagctgcccgg
tcctttgcccgcgtcacggaacttgaccccggaaatacggacgcccggttccagcagggc
tgcctgcttgcccgagccgggaaatatgaagaagccctggaaacctttgaccggctgctt
gaatcccaccctgactttaccgaagcccagaaattcaggggcaccgtgcttacagggctc
ggccggtttgaagaggcccttgaatcccttacgaaaagcctggaaaaggaaccggaagac
tataacatgtggctccagaaaggactcctgctcctggacagcaggaaattcgaaactgcc
ctggaagcttttgaaaatgccacggacctgaaacccgatgacgaaatctgctggatgaac
agaggttttgccctttattccctggagcgttatgaagaagccctggaagctttcagggaa
ggcctgcgcctgaacccttatctggagaaaggctggaacaagaaaggaatagtgctcgga
aagcttggaaaaaccgaagaagccctggaagctttcgaagaagcagtaaaactcaggccg
gatttcgaagacgcctggaaaaacatgggcctcctgctttttgcctccgaagaatacgaa
aaagccgaaaaagcctttgccgaagttctcaaaacaaaccccgaaaaccttgactccctt
tacaacaggggcatctccctgctcaggctgggaagaaatgaagaagccctcgaatacctt
gaaaaagtcgtatccctaagtcccgattatccggaccttgcctacagcctcggagttgcc
cttatggaactcggagaactggaaaaagccctggagacctttgaaaagcttgctgcaaaa
aatccggaggaactggagatccagtgcaggaaagggaagcttgcaatggagctcgggaag
catgaaactgccctacaggcattcgaaaaggtattgctcaaaaagcccggatcaaaagaa
gcctggtacaggaaagggcttgccctgctgaacctggaacgtttcgaggctgcagtaaaa
gctttcgatgaagtaatagtaaggaacactacaaatgatccctcttatgaagatgccgga
accctcaagggtttttcccagatgaagctcggaaacttcctccctgccctggaaaccttt
gaaagcgtacttgagaaaaacccggattccgggattacctggtattataagggcctgacc
ctgcagaacctgcagagacaggaagaagcagccagagcctttgagtcagcgcttcgcctg
aacccggaactttccgatgcccttgaatacagagccatctgcctctttgaaaccggacag
tacgaaactgctcttaacgcctttgaggctttgcttgagaaggacccggaaaacctttca
gccctgaacagcagggcgatttgtttccttgaactcgaaaggcataaggaagcagttgat
gccctctccaaactgcttgaaattaaccctgatatggaagaaacaaagtccaggctcgat
gaagcaaagttcaaactcggaatcgaatatttcaagcttggacagtatgatgaggctctt
gccctttttgacggaataaaggaggaaacaagagctataagtggaaaagcaagtagagaa
gctaatggagaagcaagtgaagattctcaaaaagactctcccctttactggaaagggctt
gtgtttatccggcaggaagcttatgaaaaggcccttgaagtcttttcaaagctcacaggg
aaagacccgaagtttgcggatggctggtactttatcgggctgtcctgttcaaaacttggg
aaacatgaagaagcttcaaaagccctcaagaaagtccttgaaatcgacccggcattccgg
aaccttcaagatacatattacctgctgggaatctcctgttttgaactcgaaaactttgaa
gaagcccttcaaacttttgaagaagctctttcaacagctcctgaaaattcggagaggaac
cccgacgaagcccaggacattatgtataaaaagagcctttccctgctaaggctagggaga
tatgcggaagctgaatccggttttaaggaagtgcttgcccttgacccggcaaatagtgag
ggccttgcccacctgagcactgcctgtttcaagcaggggaattacaaagaagccctcgaa
atctttgagagggtgctcagtcagaacccggcaagaaaaactatccttttcaggaaggga
ctcgctttaaaaatatttgggaaaaaacatgaggctctggaagcttttgatcttgtcctt
aaactgaaacctgactgtacatacgcccttgaccagagaggatacacacttttcgaactt
gaaaagtatgaagaggcagttgaagcctttgaagcagccctggaatactccccgaaaaag
gcagatatgcaatacctgagggctcttgcccttttcaggatcggaaacttcaaagaagcc
ctgcaggagtttgaaaaagcctttgacctcgggtgccggaagtctgagattcattattac
acgggactttcctgcttcgaaaacggagattatgaaggagccataaaagcctttgatatc
gtcctcggagcaggtttgaaggagccggaaatcctgcaaaagagagctcttgcccttttc
gaactgggaaaggcagaagaagccgtatccgcagtaaattcccttcttgaattctccgca
gaaaacctgaacggagaaatatcaaaggacttgcctgaagggaccggagaagaaaataga
gatactggagatacggaagaagctccccaggtagtagaagctcaacaaacagcaggaact
ccccaggttaaccctgaactccttgagaaattcgcgtccgctcagatagaactcgggaac
tatgaagaagccctgctcccacttgaaaagcttataagagaaagcttagcttcaaagaag
accttttacagcgcggggatagcacttatggggcttggaaggcaggaagaagcctttgag
gtcttttccgaaatccttgaggtttacccggactttaagaaagcatggtacgggaaaggc
cttgtgttattttcacaggagcgatatgaagaagcccttgaagccttcgaacaggcagtg
atggaaagtccgtacgaagtggcaaaaattgaagaatcggaaattgaagaatcggaaatt
gaagaatcggaaattgaagaatcggaaattgaagaatcggaaattggggagtcaaaaata
agtgacccggaactggaagatgcctggaccaaaatagggcttgtccagctcaaaacccgg
agatatgaggatgcttttgagacctttgaaaggatccttgagaaaaatcagacggatgca
aatgtgtggtacctgtgcgggcttgttgtgcgcgggcttgaccagaacgaagaagcagtg
gaagttttcgaaaaggctcttgaactcaaccctgccctgaccgctgcccttgaacaaaaa
ggactggcccttctttccctttgcaggtatgaagaagccagggatgccttcggctcagcc
ctcgcccgaaaccctgaaaacactgatatcctgtacaaccgggcagtagccagttacaag
ctccttgacttcgaagaagcctcaaaagactttgaaaagctgctcctctttgccccggac
ttccctgactacaccagagcctgttacatgctcgggattgccagcatagaactccaggat
tatgaaagagccctgcaggcccttgcccttgtccttgaacgcgagcccgcgcacagggac
gccctctataatatggccctcgtgctcttcaatcttgaggagtatgaagaagccgccagg
acctttgaacagctgcttgaagcctctcccgaagatcccgaaagcctgaattacctcggg
ctctgcctccttgaacttgaagacctgaacgaagccctgaaagccttcgaaaaagccgcc
ctttttaactccaaaaacgaagaagccctttacaatgcagccacgaccctcatcaagtta
aacagggtccaggagtccctcgggtactttgaccgcatccttgagatcgcccccgaaaac
tacgacgccatgaactacaaaggggttgccttctgtatgcttgaacagtacagggaagcc
ctcagggcctttgacaatgtacttaaaaaggacccgaaaaacatcaaagcggtctacaat
gtaggagtggtctgtttcaaacagaaactctacgaaaccgcagccagagccttcaaagaa
gcccttacaatcaacccctggcatgaaccttccctcagatatctcggcctctcccttgca
aagaccggggattacgaagatgccctgaaagccttcgaaaagatcctcaggataaacccg
caggacccccagtccatgaactacagaggagtcctcctcggaaagctggaaagatacgga
gaagcaataaaagcttttgacgaaatcctgagcatctacccggacatggcggacgcgaag
gaaaaactcgaggtcttaaagtcccttgagaatgaagaagagtcctattaa
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integrated database retrieval system