Methanosarcina siciliae T4/M: MSSIT_1794
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Entry
MSSIT_1794 CDS
T03865
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msw03032
]
MSSIT_1794
03400 DNA repair and recombination proteins [BR:
msw03400
]
MSSIT_1794
Enzymes [BR:
msw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSSIT_1794
DNA replication proteins [BR:
msw03032
]
Prokaryotic type
DNA Topoisomerases
MSSIT_1794
DNA repair and recombination proteins [BR:
msw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSSIT_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AKB28513
UniProt:
A0A0E3P427
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Position
2239616..2242273
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AA seq
885 aa
AA seq
DB search
MAKYKEEKESEVEIKKSYQATLIREEPGKKIELALSDPSSDEPGDEGSEPDDNGVTAILI
DDEMKRSYINYAMSVIVGRALPDARDGLKPVHRRILFSMKESGITHDKPYKKSARVVGDV
LGKYHPHGDAAVYDSIVRMVQDFSLRYPLIDGQGNFGSIDGDEAAAMRYTEVRMDRIAEE
MLADIEKETVPFRPNYDGSLEEPEVLPAKLPNLLINGSTGIAVGMATNMAPHNISEVIDG
TLMLIENPETTISGLMNVVKGPDFPTGAHILGTAGIRSAYMTGRGPVKIRAVTEIQELKK
DRQQIVVTELPYQVNKARMIENIAQLVREKVIVGISDLRDESDRDGIRVVIELSKGTNAR
VILNQLYKHTQMETTFGVINLALVDGKPKELNLKQLLEIYLEYRMEIIQKRTLYDLKKGE
ERAHILEGLRISLDNIDAVVALIKGSANADEAKQGLVDNFSLDEVQAKAILDMRLQRLTG
LETRKILEELESLIKLIAELKKILESDELKYEIIRAELLELKNKYGDARRTKIIHYTEEV
TDEDLIPEEDVVVTITNSGYIKRLPLDTYSMQRRGGRGIIGMEMKEEDFVENLFISSTHN
YILFFTNRGRLYWQKVYEIPEGSRQSRGKAIVNLLELREGEMVNAMIPVKEFAEDRYLLM
ATRAGTIKKTPLSEFRNPRKAGIIAVSLDEGDELVKVLLTDGKQEIVMVSKKGKSIRFSE
GDVRPMGRTARGVRGMTLDGPGDEVVSLDLVDETTTLLTVTENGFGKRTEYSQYPAHRRG
GKGVITIVTNLRNGSVSNVKSVAEDDELMFTSAEGIIIRIPAKDISIQGRNTQGVRIMNM
KSGDKVVGMARIKAEDEGQKQLRLTDLKAGKAESEKSEFEAGKEE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatacaaagaagaaaaagaatcagaagttgaaataaaaaaatcttatcaggct
acccttattcgcgaagagcccggcaagaaaatcgaattggcgttatccgatccttcttcg
gatgaacctggagacgaagggtctgaacccgatgataatggagttacagctattcttatt
gacgatgaaatgaagcgctcttacattaattatgcaatgagcgtcatcgtcggaagggca
cttcccgatgcaagagacggcttaaagccggtccaccgcaggatccttttttcaatgaag
gaatccgggattactcacgacaaaccctataagaagtcagcccgtgtggtgggtgacgtg
cttggtaaataccaccctcacggagacgctgctgtctatgacagtatcgtgaggatggtg
caggacttctcacttcgctatcctctgatcgatgggcagggaaacttcgggtccattgat
ggggacgaggctgcagccatgcgatataccgaagtccgcatggataggattgcagaggag
atgctagctgacattgaaaaggagaccgttccgttcaggcctaactatgacgggtccctc
gaagaaccggaagtccttcctgcaaagctcccgaatctccttatcaacgggtcaaccgga
attgccgtaggaatggcaacgaacatggcgccccacaatataagtgaggtcattgacggg
acccttatgcttattgaaaacccggaaaccacgatttcgggactgatgaacgtggtaaag
gggccggactttcccacaggagctcatatcctggggacagcaggcataaggtctgcatac
atgacaggcagagggcctgtaaagataagggcggttaccgaaatccaggagcttaaaaaa
gataggcagcagattgtagttaccgaacttccctaccaggtgaacaaggccagaatgatt
gaaaacatcgcccagcttgtcagggaaaaggtaattgtcggaatttccgatctgcgggac
gaatccgacagggatggaataagggtcgtaatcgagctttcaaagggcacaaacgccagg
gttatcttaaaccagctttacaagcacacccagatggaaactactttcggggttatcaac
cttgcccttgtggacggaaagcccaaggagctgaacctgaaacagcttctggagatctac
cttgagtaccggatggaaataatccagaagcggacgctctacgacctgaagaagggcgaa
gaaagagcccacattcttgaagggttgaggatttcccttgataacatagacgcagtggtt
gcccttatcaagggttctgcaaacgctgacgaagctaagcagggcctggtggataatttt
tcccttgacgaagtgcaggcaaaggctattctggacatgcgcctgcagcgccttaccggg
cttgagacccggaaaatccttgaggaactggaaagcctcataaaattgatcgccgaactc
aaaaagatccttgaaagcgatgaactcaagtacgagattatcagggccgaactccttgaa
ctcaagaataagtacggagatgcccgcaggacaaagatcatacattacacggaagaagtg
accgatgaagacctgatcccggaagaagacgttgtggtcacgattacaaacagcggttac
ataaaacgtcttcctcttgacacctattccatgcaacgccgcggaggcagaggtattatt
ggcatggaaatgaaggaggaagactttgtggaaaacctcttcatttcctcaactcacaac
tatatcctcttctttacaaacaggggaaggctctactggcagaaggtctatgaaatcccc
gaaggctcccgccagtcgagaggcaaagccatagtaaacctgcttgagctgcgggaaggt
gaaatggtcaatgcaatgatccctgtaaaagagtttgccgaagacagataccttcttatg
gcaacaagggcagggacgatcaaaaagaccccactatccgagttccggaacccgaggaaa
gccggcataatcgcagtcagcctggatgaaggcgacgagcttgtcaaagttctccttact
gacggaaaacaggaaattgtgatggtctcaaagaaaggcaaatccatccgtttctccgaa
ggagacgtccgccctatggggagaaccgcaagaggtgtccgcggcatgactcttgacggt
cccggcgacgaagtggtcagccttgacctggtcgatgagactacaaccctccttactgtg
actgaaaacggcttcggtaaaaggacagaatattcccagtacccggcccaccgccgcggc
ggaaaaggtgtgattacaattgtcacaaatctcaggaacggctcagtctccaatgtaaaa
tccgtagctgaagacgacgaactcatgttcacaagcgcagaaggcataatcatccgcatc
ccggcaaaagatatctcaatccagggaagaaacacacagggcgtaaggatcatgaacatg
aaatccggagacaaggtcgtcgggatggcccgtatcaaagcagaagatgagggtcaaaaa
cagctgagactcacggacctcaaagccggaaaagcagaaagtgaaaaatctgaattcgag
gccggcaaagaagaatga
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