Methanosarcina siciliae T4/M: MSSIT_2210
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Entry
MSSIT_2210 CDS
T03865
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msw03032
]
MSSIT_2210
03400 DNA repair and recombination proteins [BR:
msw03400
]
MSSIT_2210
Enzymes [BR:
msw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSSIT_2210
DNA replication proteins [BR:
msw03032
]
Prokaryotic type
DNA Topoisomerases
MSSIT_2210
DNA repair and recombination proteins [BR:
msw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSSIT_2210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
OEP
Auto_anti-p27
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AKB28929
UniProt:
A0A0E3P5I4
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All DBs
Position
2766713..2769244
Genome browser
AA seq
843 aa
AA seq
DB search
MTVVAFAEKNKAAAQIAKILGDGEVDKISVEGLPAYEFKWKGEEWLVMGLSGHIMNYDFP
EQYNKWSEVNPGTLLGIDPEKFVTRKEYGAAIKNLAKRADKIILACDYDREGENIGFEAK
TLAEEVTNAPVARARFSALSPKEVRKAFESPVDPDHNLAMAAETRQILDLKMGAAFTRFV
TLSVREKARTKDILSIGPCQTPTCGFVYEREKAIRAFKAKDFWKITAIFGAKGGDFEGTH
RAGNIHDKEKAAEIFKRLKGAKEGFVVKKTVKEAKTSPPNPLNTTEFLKRASKFLGISPE
VALEVAEQLYLAGFTSYPRTETNKYADDFDFKTLLSDFARQKEYRPFAESILSAPIVPKN
GDKDAHDHPPIHPIRAAARGEISAAINIQHAAEVYDLIVRHFLSNLMPAAVFEKTHLHLQ
VREEPFDSSGTVLKDAGWLEAYPFENKKDKLLPFVEEEEKVDVKKLSNTKSKTSPPKKLT
EAELLTLMDKHGIGTKATAPTHIETNKKRGYFETKGKTVSILDTGFTLMDGLSLTVPILV
RPDIRAKIEALIQEVEDGKKEFEAALDEGTILIKEMYAQLEANKKELTANIAGTIKDEAA
LEDKKNYIGTCKACGHVLRIVQTDTGRFVGCTGYPDCRNSFPLPKIGALTVLRSKECKKG
GAAVLKVGNKYNWAVGIGPCFKCELEKECYPPETVGPCPQCDGSMFLISFKDSRFLGCTK
RCGYTHSVPKTGKLILLDKSCETCGWKLFRLKEDENPELEFCVNRRCPEGRKYWKQAGSR
TVPRGQEKASAASAVSSPRAGAGRKPEAKSTPEARSTARKAESSAPGRVSKLSPASGRRK
ESK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgtcgcatttgcagaaaagaataaggcagccgcccagatagcaaagatcctg
ggcgatggggaagtggataaaatttcagtagaagggctgcctgcttatgagtttaaatgg
aaaggagaagaatggcttgtgatggggttatccgggcacatcatgaactatgattttccg
gaacaatacaataaatggagtgaggtaaaccccggtacgctgctcgggatagaccccgaa
aaattcgtgaccaggaaagagtacggagctgcaataaaaaacctggcaaaaagggcagac
aaaattatccttgcatgcgactatgacagggaaggggaaaacatagggtttgaggcaaaa
acccttgctgaagaggttacaaacgcgcctgttgcaagggcacgcttttcagccctgtcc
ccaaaagaagtcaggaaagcttttgaaagccccgtagaccctgaccataacctggcaatg
gctgcggaaaccagacagatccttgacctgaaaatgggtgcggcttttacaaggtttgtt
acgctttcggttagggaaaaggcaaggacaaaagatatcctttcaatcgggccctgccag
acgcctacctgcggttttgtttacgaaagggaaaaggcgatccgggcttttaaggcaaag
gacttctggaagattactgcaattttcggagcaaaaggcggagacttcgagggtacccac
agggcaggaaatatccacgacaaagaaaaggcagcagagatcttcaaaagattaaaggga
gcaaaagaaggctttgttgtaaagaaaacggtaaaggaagcaaagaccagccctccgaat
ccgctcaatacaacggagtttctgaagcgggcttcaaagttcctgggaattagcccggaa
gttgcccttgaagttgccgaacagctttacctcgccgggtttacaagctaccccaggaca
gagaccaacaaatatgcagacgacttcgacttcaagaccctgttatctgattttgcaagg
caaaaagagtataggccctttgccgagtcaatcctctctgccccgatagtcccgaaaaac
ggagacaaagatgcgcacgaccaccctcctatccaccctatccgggcggctgcgagggga
gaaatcagcgctgcaataaacatccagcacgcggcagaggtttatgaccttattgtaagg
catttcctgtcaaaccttatgcctgcagcagtttttgaaaagactcaccttcacctgcag
gtccgggaagagcctttcgattcctcagggaccgtgcttaaagatgcggggtggcttgaa
gcctatccatttgaaaacaaaaaagataagctcctcccctttgtagaggaagaagagaaa
gtggacgtaaaaaagctgagcaacaccaagtccaaaaccagccctccgaagaagctgacc
gaagctgagctcctgacccttatggacaagcacgggatcgggacaaaagcaacagctcct
acccatatcgaaacaaacaaaaagcgcggctatttcgaaaccaagggcaagactgtctcg
atcctggacacgggatttactctgatggacggactctccctgaccgtcccgatccttgtc
aggccagacatccgcgcaaaaatcgaagccctgattcaggaagtagaggacggaaaaaaa
gagttcgaagctgcccttgacgagggcacgatcctgatcaaagagatgtacgctcagctt
gaagcaaacaaaaaggagctgaccgcaaacattgcaggtacgatcaaggacgaagctgcc
ctcgaagacaagaaaaactatatcgggacctgcaaggcctgcgggcacgtactcaggatc
gtgcagacggacacagggcgttttgtgggctgcacaggctatccggactgcagaaactct
ttccctctgccgaaaatcggggctctcacggtgctccggagcaaggaatgtaagaaggga
ggtgcagctgtcctgaaggtaggcaataaatacaactgggctgtcggcataggtccctgc
tttaaatgcgaacttgaaaaggaatgctatccccctgaaaccgtgggtccctgcccccag
tgtgacgggagcatgttcctgatctcttttaaagacagccgtttcctgggctgcacaaaa
cgttgtgggtacacgcattcggtccccaagaccggaaaactgatcctgctcgataaaagc
tgtgagacctgcggctggaaactcttcaggttaaaagaggacgaaaacccggaacttgag
ttctgcgtaaaccggcgctgtccggaaggccggaaatactggaaacaggcaggctccaga
actgtgcccaggggtcaggaaaaagcttctgctgcttcggcagtttcctcaccgagggcg
ggagcaggaagaaaacctgaagcaaaaagtacaccggaagcaagaagtacggcaagaaaa
gcggaaagctcggcacccggtagagtttcaaaattatctcctgcatcgggcaggcggaaa
gagagcaaatga
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