Methanosarcina siciliae T4/M: MSSIT_2681
Help
Entry
MSSIT_2681 CDS
T03865
Name
(GenBank) radical SAM domain protein
KO
K22226
Fe-coproporphyrin III synthase
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw00860
Porphyrin metabolism
msw01100
Metabolic pathways
msw01110
Biosynthesis of secondary metabolites
msw01240
Biosynthesis of cofactors
Module
msw_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MSSIT_2681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Hydrolase_6
B
Glyco_hydro_97
Motif
Other DBs
NCBI-ProteinID:
AKB29400
UniProt:
A0A0E3P6J5
LinkDB
All DBs
Position
complement(3408436..3409635)
Genome browser
AA seq
399 aa
AA seq
DB search
MIGISKLYCGTVEPSDALRYGRDSKRLPSHLLQFSKDKKPVVVWNMTRRCNLKCVHCYAQ
AKDMEFKNELSTEEGKALIDDLAAFGSPVMLFSGGEPTMRKDLPELAAYAREKGMRAVIS
TNGTLIDKDLAKKLKAVGLSYVGVSLDGVRETNDKFRGMKGAFDAALRGLHNCQEEGIKV
GLRFTVNKQNVRDIPAIFDLLEEENIPRVCFYHLVYAGRGSTMVDEDLSPEESRKAVDLI
MERTKALHEKGFPAEVLTVDNHCDGPYIYLKLLKENPERAAEVFELLSMNQGNSSGIGIG
CVSWDGSVHADQFWRHYSFGNIRERPFSEIWTDQSDELMAGLKHRKPLIQANADRCAKCK
WFDVCNGNFRVRAEAVYGNIWADDPACYLTKEEIGYDEA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgataggcatctcaaaactttactgcggaaccgtggaaccttctgacgcccttcgctat
ggaagggactcaaagcggcttccatctcacctgctgcagttttcaaaagataaaaaaccg
gtggtggtctggaacatgacccgccgatgcaatctgaaatgcgtccactgttatgcccag
gcaaaggacatggaattcaaaaacgagctttccaccgaagaaggaaaagcccttatcgat
gaccttgccgcttttggctcccctgtaatgcttttttccgggggtgaacctacaatgcga
aaggacctccccgaacttgctgcctacgcccgggaaaaaggcatgagagcggtaatttcc
acaaacgggactctcatagataaagacctggcaaaaaagctcaaagccgtgggcctctcc
tatgtgggcgtttccctggacggcgtcagggagacaaatgacaaattcaggggcatgaaa
ggggcttttgatgctgccctcaggggcctgcataactgccaggaagaaggtataaaggtc
gggctccgcttcaccgtcaacaagcagaacgtccgggacatccctgccatcttcgatctg
ctcgaggaagaaaacatccccagggtctgcttctaccacctggtctatgccggcaggggt
tcgacaatggtggacgaagacctctcccctgaagagtccagaaaagccgttgacctcata
atggaacggacaaaagccctgcacgagaaaggcttccccgcagaagtcctgaccgtggac
aaccactgcgacggcccgtacatctacctcaaactcctgaaagaaaacccggaaagggca
gccgaagtgttcgaactcctgtccatgaaccagggaaactcttccggaataggtattggc
tgcgtgtcctgggacggctcggtgcacgccgaccagttctggagacactactccttcgga
aacatcagggaacgccccttcagcgagatctggaccgaccagagtgacgagctcatggca
gggcttaagcacaggaagccccttatccaggctaatgccgaccgctgcgcaaaatgcaaa
tggttcgacgtctgcaacggaaacttccgggttcgagccgaagccgtatacggaaacatc
tgggcagacgaccctgcctgctacctcacaaaagaagaaataggatacgacgaagcctga
DBGET
integrated database retrieval system