Methanosarcina siciliae T4/M: MSSIT_2689
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Entry
MSSIT_2689 CDS
T03865
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSSIT_2689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msw03009
]
MSSIT_2689
Ribosome biogenesis [BR:
msw03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSSIT_2689
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GFIT
Motif
Pfam:
SBDS_N
SBDS_C
SBDS_domain_II
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AKB29408
UniProt:
A0A0E3P6H9
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All DBs
Position
3420235..3420927
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AA seq
230 aa
AA seq
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MVSLDEAVTARLKRGSKHFEVLVEPEGALAYKRGDEVNLEDILAVETIFEDANRGDRAAE
SEILNSFETTDPFEIAAVILKSGELQLTAEQRKRMLEEKKKKVIYTISRNAINPQTRAPH
PPARIERAMEEAKVHIDPLKSVDQLVTKTMKAIRPLIPIRFEEINIAVKIPPEYAPKAYG
DISKAGTITKEEWQSDGSWIAVVRIPAGVQTDFYALINHLTKGEAQTKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggacgaggcagtgactgcccggcttaaaagaggcagcaaacatttcgaa
gtcctggtcgagcccgaaggggctctggcctacaagcgaggagatgaagtaaacctcgaa
gacattctggcagttgagactatcttcgaagatgcaaacagaggggaccgggcagcagag
tccgaaattctcaactcttttgagacaaccgacccctttgagattgctgccgtgatcctg
aaaagcggagagcttcaactcaccgctgaacagagaaaacgaatgcttgaagagaaaaag
aaaaaggttatctataccatttccagaaatgctataaaccctcagactagagcaccacac
cctcccgcacggatagaaagagcgatggaagaggcaaaagtgcatatagaccctttaaaa
agcgtggatcagctggtaaccaaaacaatgaaagccattcgcccgcttatcccgatacgc
tttgaagaaataaatattgctgtgaaaatccctcccgaatatgccccgaaggcatatgga
gatatttccaaggccggaaccattacgaaggaagaatggcagagtgacggctcatggatt
gcagtagtgaggattcctgcgggagttcagactgatttttacgctcttataaatcatctc
acaaagggagaggctcagactaaacttttataa
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