Methanosarcina siciliae T4/M: MSSIT_2766
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Entry
MSSIT_2766 CDS
T03865
Name
(GenBank) Phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03410
Base excision repair
msw03430
Mismatch repair
msw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSSIT_2766
03430 Mismatch repair
MSSIT_2766
03440 Homologous recombination
MSSIT_2766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msw03400
]
MSSIT_2766
DNA repair and recombination proteins [BR:
msw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSSIT_2766
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSSIT_2766
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSSIT_2766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKB29485
UniProt:
A0A0E3P6V0
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Position
3517033..3518031
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AA seq
332 aa
AA seq
DB search
MKEPQNQLKAKTLILTHGDSDGICSGAIAKSAYPEAYVYFTSPVSLLDKLDLIEDVENLI
ICDIAIEEKRCSELYSALNKLAEECNLYYIDHHPLPEGCGKENWFFHDTGVCASELTYRV
FEEILSQEMRRVAIYGAIGDFCDNTPCVRSWVRDWDKRSLFFQAGTLIQAILHKGKDYDF
KRILLEPLSKDVIPSNIPDLLELAREAAINEEKIRLFVKENVEVLKNSAYIVNTNNSISK
AAIYAASYGKREVGIAAEYREKKGVYDLSIRSRGKADINRLLRSIAPKFGGSGGGHPVAA
GARIPENSLEAFLRAFDKKLGEANEVKYNGNK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccccagaaccagcttaaagcgaaaaccttgatcctgactcatggtgactct
gacgggatatgttcgggagcaattgcaaaaagtgcctatccggaagcatatgtctatttc
acaagtcctgtcagtcttctggacaagttagatctcattgaagacgttgagaatcttata
atctgcgatattgctatagaggaaaagcgctgttctgaactctactctgcactcaataaa
ttagcggaagaatgcaacctgtattacattgatcaccatccgctgccggaagggtgcgga
aaagagaactggttttttcacgatacgggggtatgcgcctctgaactcacttacagggta
tttgaagagatcctgagccaggaaatgaggagagtggcaatctacggagctataggcgac
ttctgtgacaatacaccctgtgtaagaagctgggtaagagattgggataaaaggagccta
ttttttcaggccgggactctgatacaggcaatacttcataaggggaaagactatgatttc
aagagaatcctgcttgaacccctctcaaaagatgtaattccttcaaatattcccgatctg
ctcgagcttgccagggaagctgcaattaacgaagagaaaatcaggctttttgttaaagaa
aatgtggaagtcctgaaaaacagtgcgtatattgtaaatacgaataactccatctcaaag
gcagcgatctatgcagcctcctatggcaaaagggaagtgggaattgcagccgaataccgg
gagaaaaagggtgtttacgacctgagcattcgttcccggggtaaggctgacataaaccgt
ctccttcgctcaattgctcctaagtttggagggagcggcggaggacatcctgttgcagca
ggagcgcgtattcctgaaaattcccttgaggctttcctcagagcttttgataaaaagctt
ggggaagcaaatgaggtaaaatacaatggaaacaagtaa
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