Methanosarcina siciliae T4/M: MSSIT_2851
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Entry
MSSIT_2851 CDS
T03865
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msw03016
]
MSSIT_2851
Enzymes [BR:
msw01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MSSIT_2851
Transfer RNA biogenesis [BR:
msw03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MSSIT_2851
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Paralog
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AKB29570
UniProt:
A0A0E3P6V7
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All DBs
Position
3615719..3616771
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AA seq
350 aa
AA seq
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MKTQLEGDRILAGKEAVAELYKTGYFGRPREDGLELSLVEAAYLQSRGKIEIELEGKKLD
FRAFFEQASLRQPNFELKYIVYKDLKERGYYVQPSAADFRVYPRGSHPGKSAAKIFVHVL
SERQPLPVKLLQDSVISAENVHKQFILAVVDEESDLTFYEIKTAAPQGEMSEPYPSVKTD
ATFLEDRVIAWDAETSGALYARGFYGKMLDPERLQLSLVESLFLFSRKVIVVRDRKGKVF
SFDEFVEKASEIESSFLRKYCAYKALRDSGHVVKTGFKFGTHFRVYRKVESIEKIPHSEY
LVNVIPSDYEFRLPVLSGAVRLANSVRKRMLFAVEKGEEVEYLDIGRVKM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacacaacttgaaggagaccggatccttgccggaaaggaagcggttgccgaactt
tacaaaacaggttatttcgggcggcccagggaggacgggcttgagctctcccttgtggaa
gccgcatacctccagtccagaggaaaaatcgagatagagcttgaaggaaaaaagcttgat
ttcagggcttttttcgagcaggcttctctgaggcagccgaatttcgagctgaagtatatc
gtatataaagacctcaaagagcggggatattatgtccagccttcggctgcggacttcagg
gtctaccccagaggcagccatccagggaaaagtgcggcaaaaatctttgtccatgtcctg
tcggaaaggcagccccttcccgtaaagctcttgcaggattcggtcatctcggcagaaaac
gtgcacaagcagtttatcctggccgtcgtggatgaagaaagcgacctgaccttctacgag
attaaaaccgctgctcctcagggagagatgtctgaaccctacccctcagtcaaaaccgat
gcgactttcctcgaagacagggtaatcgcctgggatgctgagacttccggggctctttat
gccaggggtttctacgggaaaatgctcgatcctgaaaggttgcagctctcccttgttgag
tccctcttcctcttttcgcgaaaggttatagtcgtcagggacaggaaaggcaaggtcttc
tcctttgatgaatttgttgagaaagcctcggaaatcgaaagttctttcctgcggaaatac
tgtgcatataaagctctgcgagactcggggcacgtggtcaagaccggctttaagttcggg
acccatttcagggtctacaggaaagtcgagtccatagaaaaaattccccactccgagtat
ctcgtaaacgtaattccctctgattacgaattcaggcttccggttttgtccggggctgtc
aggcttgcaaacagcgtgcgcaaaagaatgctctttgcagttgagaaaggggaagaagtc
gagtacctggacatcggcagggtcaagatgtga
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