Methanosarcina siciliae T4/M: MSSIT_3103
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Entry
MSSIT_3103 CDS
T03865
Name
(GenBank) SSU ribosomal protein S27Ae
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MSSIT_3103
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MSSIT_3103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
msw03011
]
MSSIT_3103
04121 Ubiquitin system [BR:
msw04121
]
MSSIT_3103
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msw04147
]
MSSIT_3103
Ribosome [BR:
msw03011
]
Ribosomal proteins
Eukaryotes
Small subunit
MSSIT_3103
Archaea
MSSIT_3103
Ubiquitin system [BR:
msw04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
MSSIT_3103
Exosome [BR:
msw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSSIT_3103
Exosomal proteins of colorectal cancer cells
MSSIT_3103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S27
Zn_ribbon_Nudix
Ribosomal_L37e
Rcat_RNF216
IBR_1
Zn_ribbon_RPB9
IBR
Zn_Ribbon_TF
Zn_ribbon_3
Cas12f1-like_TNB
DUF6671
DUF1451
Zn_ribbon_11
MqsA_antitoxin
Zn_ribbon_IS1595
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
AKB29822
UniProt:
A0A0E3P9N5
LinkDB
All DBs
Position
3909172..3909321
Genome browser
AA seq
49 aa
AA seq
DB search
MAVKDYYKVQGDSVTRLKQFCPRCGPGIFLADHKNRLACGKCGYTEFKK
NT seq
150 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaagattactacaaagttcagggcgactccgtaaccagactcaaacaattc
tgtcccagatgcggacccggcatattccttgccgaccacaaaaaccgccttgcctgcgga
aagtgcggctacaccgaattcaagaaataa
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