Methanosarcina siciliae T4/M: MSSIT_3404
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Entry
MSSIT_3404 CDS
T03865
Name
(GenBank) Deoxyribodipyrimidine photolyase, type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msw03400
]
MSSIT_3404
Enzymes [BR:
msw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MSSIT_3404
DNA repair and recombination proteins [BR:
msw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MSSIT_3404
Prokaryotic type
MSSIT_3404
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GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AKB30123
UniProt:
A0A0E3P8D1
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Position
4279679..4281067
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AA seq
462 aa
AA seq
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MNPKRIRTLKPGKSGDGSVAYWMSRDQRVEDNWALLFARAIAQETNVPVVVVFCLTEGFL
GAGRRHYEFMLKGLQELEGALSRRKIPFYFLRGDAGQKIPEFVKEYDVGTLITDFSPLRI
KAEWVEKIIPEIEIPFFEVDAHNVVPCWEASPKQEYAAHTFRPKLYGHLSEFLEEFPELE
PNSESLKIRSGTGMPGILSRAQETGIKALLPEEISDKNKDLLFEPDNFEPGEKAARKVME
SFLAERLDSYNTLRNDPTKNVLSNLSPYLHFGQISAQSVVLQVEKAKNDPESKKDFLDEI
LVWKEIADNFCYYNPEYDSSESFPDWAKKSLNAHRNDRRKYIYTLEEFEAAKTHDPLWNA
SQIELLRTGKMHSYMRMYWAKKILEWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWS
IGGVHDRAWKEREVTGKIRYMSYEGCKRKFDVKLYIEKYSAL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctaaacgcatccggactctcaaaccggggaaatcaggagacgggtctgttgct
tactggatgagccgcgaccagagggttgaggacaactgggccctgctctttgcacgggca
atagcacaggagacgaatgtccctgtagttgtggttttctgtctgactgaagggtttctg
ggagctgggagaagacattatgaattcatgctcaaaggtctgcaggaacttgagggagcc
ctttcccggagaaagattcccttctactttctacgaggagacgcggggcaaaaaatccct
gagtttgtaaaagagtatgatgtagggactctaattactgatttcagtccgcttcgcata
aaggctgaatgggtagagaaaattattcctgaaatcgaaattccgttttttgaggttgat
gcccacaatgtggtgccctgctgggaagcttctccaaaacaggagtatgcggcgcatact
tttcgtccgaaactctatgggcacctctccgaatttctggaggaatttccggaacttgag
ccaaactcagaatctttgaaaatccgatcagggaccggtatgccgggaattttatcccgg
gcacaggaaaccggaataaaagccctgcttccggaggaaatctccgacaaaaataaggat
ttgctctttgagcccgataatttcgaacccggagaaaaagctgctaggaaggtaatggag
agttttcttgcagagcggcttgattcttacaacacgttgcgtaacgaccctacaaagaac
gtactctcaaacctttccccttaccttcatttcgggcaaatctcagcgcaaagtgtggtg
cttcaagtggaaaaagcaaaaaatgacccagaatcaaagaaagatttcctggacgagatc
cttgtatggaaagagattgcggacaacttctgttattacaaccccgaatatgatagctct
gagagttttcccgactgggcaaagaagtccctgaatgcccaccggaatgaccggagaaag
tatatttacacccttgaggagttcgaggccgcaaagacgcatgatccactctggaatgca
agccagattgaactgctccgtaccgggaagatgcacagctatatgcggatgtactgggca
aaaaagattcttgaatggagcgaatctcccgaaaaagcccttgaaattgcaatctgcctg
aacgacaggtatgagctggacggaagggaccccaatggttatgccggaattgcctggagt
atcggaggcgtccatgaccgagcctggaaggaaagagaagtaacaggaaaaatccgatat
atgagttatgagggctgcaaaagaaaattcgacgtcaaattatatattgaaaaatattca
gctctgtag
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