Methanosarcina siciliae T4/M: MSSIT_3435
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Entry
MSSIT_3435 CDS
T03865
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSSIT_3435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msw02000
]
MSSIT_3435
Transporters [BR:
msw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSSIT_3435
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Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_23
AAA_22
AAA_29
nSTAND3
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
AKB30154
UniProt:
A0A0E3P8F4
LinkDB
All DBs
Position
complement(4306978..4307961)
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AA seq
327 aa
AA seq
DB search
MTRIPITPDPGSRNGSPPLLEIRNLKVHFPDDTGPVKAVDSIDLIVREKECFGIIGESGS
GKTVLCLAILGLLAGDASFSGEIIFKGENLFSMSSRKIRKIRGKEIGAIFQNPATSLDPV
FTIGDQLSEALIRGEGFSKAEVNTNLILLLDRVSIRDPALRIRQYPHELSGGLRQRVMIA
MGIAAAPSLIIADEPSSGLDLRIKRRIISLLQDISRNASMFIVTHDLELAEKLFETLAVM
YAGEIVEIADCKEFFKAPMHPFSEGLLNSLPSRGMQPIPGSSPSLTALPEGCRFFPRCRY
AMEICKNKHPELFHVMGKRQVRCFKYA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaattcctattacccctgatcccggatccaggaatggttctccacccctgctt
gagatccggaatttgaaagttcattttcctgacgatacaggccctgtgaaagcagttgac
agtattgaccttatagtcagggagaaggaatgctttggaataataggagagtccggctca
ggaaaaacggtgctttgcctggctattctcgggcttctggccggagatgcgtcattttca
ggagagatcatttttaaaggggaaaaccttttttcgatgtcttcccggaagatcaggaaa
attcgcggaaaggaaataggtgcaatttttcaaaacccggcaacttcccttgaccctgta
tttacaataggggaccagctttcggaagccctgatcagaggcgaaggcttttcgaaagct
gaggtaaacacaaatttaattcttctcctggatagagtcagcatccgggaccccgctctt
cgcatcaggcagtacccccacgaactgagcgggggcctgaggcaaagggtgatgattgcc
atgggaattgcagccgccccctcccttatcattgcggacgaacccagtagcgggctggac
ctcaggataaagcggagaatcatatcccttttgcaggatatcagccgaaatgcgtcaatg
tttatagttacacatgatctggagcttgcagaaaaactctttgagactcttgctgtgatg
tacgcaggagaaattgtagaaattgcagactgcaaagagtttttcaaggctccgatgcac
cctttttcagaagggcttttgaattcgcttccttccaggggaatgcagccgattccggga
tcaagcccttccttgactgctctcccggaggggtgcaggtttttcccccggtgcaggtat
gcaatggagatttgcaaaaataagcacccggaactatttcacgtaatgggaaaacgccag
gtgaggtgttttaagtatgcttga
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