Methanosarcina siciliae T4/M: MSSIT_3617
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Entry
MSSIT_3617 CDS
T03865
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msw03036
]
MSSIT_3617
Chromosome and associated proteins [BR:
msw03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MSSIT_3617
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
Crescentin
Motif
Other DBs
NCBI-ProteinID:
AKB30336
UniProt:
A0A0E3L9I6
LinkDB
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Position
complement(4558428..4561955)
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AA seq
1175 aa
AA seq
DB search
MYIKEIEFVNFKSFGKKVKISFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK
LTDLIYNGDETKKPDFAQVTIRFDNTDRKLPLEIDEVVVSRKVKRTKNAYYSYFYFNGKA
VSLGEIHSQIAKAGVTPEGYNVVMQGDVTQIISMSSVERRKIIDEIAGVAEFDERKQKAL
GELEVVRQQVERVDIILEEVRAQLGKLSGERDQALKYQALKTEKIKFEGYVLLSKLKDAR
TELENVDKELAGKEEHLEKVQVLLDERVKELEALEQALEQISLEIRKKGEDEQLQIKREI
EETKGEISRCVDSIELSESELEDADAKRRKAFVDIDATKGKVKELEEKIEAENVRKESIS
SELSERKTERMLLQSRIADVDARFAATRDELMAARKKLEDVKNEKNELIRNEDRLLDTLR
RKSSELRDIENQIKDAEAAVTASDSDTLSVQYEIEKLTGNLESLIKDRDDIESSHFRIKE
DIRKLEGRLHSLQQEYAIAEARVRASEHGGGYSRAVEMVIGASRQNELFGIHGTIAQLGK
VDRRYASALEVAAGNRMQAVVVDNDGDAAEAIEFLKRRKGGRATFLPLNKMRDSRRLGSL
NYENGVIGYAIDLIEFDPEFEPAFWYVFQDTLVMEDLASARRLMGKARMVTLEGELLEKS
GAMVGGSLSSKSGISFAAAEKDKLLELAEEIKSLDASRNAAISKQDSIESHVFELSRKIR
DCEASISRKELELQEIAGREAKLADLLESKQADLRAIEEARTELRAEMDRVIAEKAEKEA
EASELEAQVVELEAKLADSPLPEINKKAEFVEEEIRRLDGRIRDTEASLNALQLEKEYAE
QKITEAKELIRELDEKKASRREKMGSLKAKISELEALLEEKQKRELQLSDELIGLQKERE
SVQVEYTAVKRRVSTASTTLEKAKQHVLTLTATKSALVDQEKQLLEEIERRGIEESSEVP
SYETVYMRIQAIEEAMRRLEPVNMRAIDEYNEVELRLSDLQGKRDTLFSEREQLLERIDQ
YEQLKRDAFMEAYTSINSNFKAIFYELSDGMGELLLENPDDPFAGGMTLRAQPKEKTLQR
IEAMSGGEKSLTALAFIFAIQQYRPAPFYAFDEIDMFLDGWNVERVSRRVKTSGSKVQFI
VVSLRKPMIQAASRTIGVTMQENNITSITGVKLNG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgtacataaaagaaattgagttcgttaatttcaagtccttcggaaaaaaagtaaagatt
tccttttacaatgactttaccactatttccggtccaaacgggagtgggaagtcgaacatc
atagacgggattctctttgcactcgggcttacaagctccaggaccctccgggctgaaaaa
cttacggatcttatttacaatggtgatgagacaaaaaagcccgattttgcccaggttacg
atccgttttgacaatactgaccgcaagctgccgttagagattgatgaggttgtggtctca
agaaaggtcaagcggacaaaaaatgcgtattacagctacttttactttaacggaaaagcc
gtgagcctgggagaaatccattcccagattgcaaaggcgggagtaacgcctgaaggttac
aatgtggtgatgcagggagatgtcacacagatcatctccatgagctctgtggaaaggcga
aagattattgatgagattgccggagttgcggagtttgatgagcgcaagcaaaaggctctc
ggcgagctggaggtcgtccggcagcaggtcgaacgcgtggacatcattcttgaagaggtg
cgtgcccagcttggaaaactctccggggaacgagaccaggccctgaaatatcaggctctg
aaaactgaaaaaatcaaatttgaaggttatgtcctgctctccaagctcaaggatgccaga
accgaactggaaaatgtggacaaagaacttgcaggcaaagaagagcaccttgaaaaagtt
caggttttgctggatgagagggtaaaggaattagaagcccttgaacaggcccttgaacaa
atttcccttgaaatccggaaaaaaggggaagatgagcagctgcagatcaaaagggaaatc
gaagagaccaaaggggaaatttcccgctgtgtggatagcatcgaactttcggaatccgaa
cttgaggatgctgacgcaaagcgcagaaaagcttttgttgacatcgacgccacaaaaggc
aaggtgaaggagctcgaagagaaaatcgaagctgaaaatgtgagaaaagagagcatttca
tccgagctatccgagagaaaaaccgagcgtatgctgcttcagagcaggattgcggatgtg
gatgccaggtttgcggcaacaagagacgagctcatggctgctcgcaagaaacttgaggac
gttaaaaacgagaaaaacgagcttatccgcaatgaggaccggctccttgatactctccga
agaaaatcctcggaactgagggatattgaaaaccagatcaaggatgccgaagctgcagtt
actgcctctgacagtgatacgctttctgtccagtatgagatcgagaaacttacgggaaac
ctggaatcccttataaaagaccgggacgacatcgagagcagccatttcaggataaaggaa
gacatcaggaaacttgagggaaggctgcacagcctccagcaggaatatgcaattgccgag
gcaagggtccgggcttcggaacatggaggcgggtattcaagggctgtggaaatggtaata
ggggcttcccggcagaatgaacttttcggaattcacgggacgattgcccagctcggaaaa
gttgaccgcaggtatgcgtcagctcttgaggttgcagcagggaacaggatgcaagcagtt
gttgtggataacgacggagatgctgctgaagcaatcgagtttcttaagaggagaaagggc
ggaagggctactttcctgccgcttaacaaaatgagggattcaaggcggcttggaagcctc
aattatgaaaatggtgtaataggatatgcaatcgatctaattgaatttgaccccgagttc
gaacccgctttctggtatgtttttcaggatacccttgttatggaagaccttgccagtgcc
cgccgcctgatgggaaaggcgagaatggtcactcttgaaggggagcttcttgaaaagagc
ggggcaatggttgggggttctctctcttcaaaatccgggatctcttttgcagccgcagaa
aaagataaacttcttgaacttgcagaagagattaaatctcttgacgcaagccggaatgca
gcgatcagtaaacaggacagcattgaaagccacgtttttgagctgagcaggaaaatccgc
gactgtgaagccagtatttccagaaaagaactcgagcttcaggaaattgccggcagggaa
gcaaaacttgccgacctcctagagtccaaacaggcagatttgagggcaattgaagaggca
aggacggaactcagggctgaaatggacagggtaattgcggaaaaggctgaaaaagaggca
gaggcttccgaacttgaggctcaggttgtcgaacttgaggcaaagctggctgattcccct
ctccccgagatcaacaaaaaagccgagtttgtggaagaggaaatccggaggcttgatggc
aggatcagggataccgaagccagcctgaatgccctgcagcttgaaaaagagtatgctgag
cagaagattaccgaggcaaaggagcttatcagggaacttgatgaaaagaaagcttcaagg
cgggaaaaaatgggttctcttaaggcaaagatttcggaacttgaagcactgcttgaagag
aaacagaaacgggaacttcagctttccgatgaacttatagggctccagaaggaaagggaa
agtgttcaggttgaatacactgcagtaaagcgtagggtcagtacagcttcaactactctg
gaaaaggcaaagcaacatgtccttacacttacagctactaaaagtgcccttgttgaccag
gaaaagcaactgcttgaagagatcgagaggaggggcatagaagaaagctcagaggtccct
agttacgaaaccgtttacatgaggatccaggcaatcgaagaagctatgcgcaggcttgaa
cccgtaaacatgcgggcaatcgatgagtataatgaggttgaactccggctttccgacctg
cagggtaaacgcgacacgctcttttccgaaagggaacagctccttgaacgcatcgaccag
tacgagcagctcaaacgggacgcctttatggaagcttatacgagtataaattccaatttc
aaggccattttctacgagctttccgacggcatgggtgaactcctgctggaaaatcccgac
gatccctttgcaggaggaatgaccctcagagcccagccaaaagaaaagaccctccagcgc
atagaagctatgtccggaggagaaaagagtcttacggcacttgctttcatctttgcaatc
cagcaataccgccctgctcctttctacgcctttgacgaaatcgacatgttccttgacggc
tggaatgtggaaagggtttcaaggagggttaaaacttcaggctcaaaagtccagttcatc
gttgtttccttaagaaaacccatgatccaggctgcaagccggacgatcggggttacaatg
caggagaataatatcacgagcattaccggagtgaagcttaatggctga
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