Methanosarcina siciliae T4/M: MSSIT_3679
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Entry
MSSIT_3679 CDS
T03865
Name
(GenBank) Transcriptional repressor of nif and glnA operons
KO
K09720
HTH-type transcriptional regulator, global nitrogen regulator NrpRI
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msw03000
]
MSSIT_3679
Transcription factors [BR:
msw03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSSIT_3679
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Gene cluster
GFIT
Motif
Pfam:
NRD1_2
HTH_12
HTH_21
CggR_N
HTH_20
DUF2785
Motif
Other DBs
NCBI-ProteinID:
AKB30398
UniProt:
A0A0E3P8X5
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Position
4648049..4649023
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AA seq
324 aa
AA seq
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MMDPQIERKLIEIMRVIHESDKPIGARAIADELNNRGYDIGERAVRYHLRILDERGFTNK
HGYAGRTLTDLGESEMNDALIGDRFGFVISRIEEMAFRTTYDPETEKGDVVVNISYFDKD
DFETVIELISYTAHAGYMISPRVRIFEEDSESEIHLPPGKIGIATVCSVTFDGLLLKAGI
PVEPAYGGILQIENKEPSRFLDLISYSGTSIDPIKIFMNRTPTSVLEVLEKGDGKILANM
RQINASAYETAKGIIKKAEKVDLAGCITIGEIDEFLLGAPVETGKFGVAVVGGINGVCAL
EETGIEIETNPISMMLDYQTMSEI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatggacccgcaaatcgagcgaaaacttattgaaattatgagggtgattcacgaaagt
gacaaaccgataggtgcccgggcaatagctgacgaattaaacaaccggggctatgatata
ggagagagggctgtccgctaccatctgaggatccttgatgagagagggtttacgaacaaa
cacgggtatgccgggcgtacgcttacggatcttggagaaagcgagatgaatgatgccctc
attggggatcgttttggttttgtaatatccaggatagaagaaatggcattcagaaccact
tatgaccctgaaacggagaaaggagatgttgtggtaaatatctcttattttgacaaagac
gatttcgaaactgttattgaattgatttcgtatactgctcacgcggggtatatgataagc
ccgagggtacggatcttcgaagaggactcggaatccgaaattcacctcccgcccgggaaa
ataggaatagctaccgtttgcagtgtcacttttgacggacttctcctgaaagcaggcatt
cccgtagaacccgcctatggagggatcctccagatagaaaacaaggaaccatcacgtttc
cttgacctgatttcctacagtgggacctccattgacccgataaagattttcatgaatcgg
actcctacatccgttcttgaggtccttgaaaaaggagatggaaaaatccttgccaatatg
cgacaaataaatgcttccgcttatgagacggcaaaaggaattataaaaaaggcagaaaaa
gtggatctggcaggctgcattaccataggagaaattgatgagttcttacttggagctccg
gttgaaaccggaaagttcggggttgctgtagtcggaggaattaacggggtctgtgctctc
gaggaaacagggattgagatcgaaacaaacccgatttctatgatgcttgactaccaaaca
atgtcagagatatga
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