Methanosarcina siciliae T4/M: MSSIT_3808
Help
Entry
MSSIT_3808 CDS
T03865
Name
(GenBank) Archaeal heat shock regulator, ArsR family
KO
K07721
ArsR family transcriptional regulator
Organism
msw
Methanosarcina siciliae T4/M
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msw03000
]
MSSIT_3808
Transcription factors [BR:
msw03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
MSSIT_3808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_Cmi2_C
HTH_20
PF0610-like_N
MarR_2
HVO_A0114
MarR
TrmB
LexA_DNA_bind
HTH_24
WHD_DprA
HTH_11
HTH_36
OmpH
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AKB30527
UniProt:
A0A0E3P936
LinkDB
All DBs
Position
4816308..4817000
Genome browser
AA seq
230 aa
AA seq
DB search
MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIEFSV
DEQRRKYFNIANNMRLEVSVSPYSYTMSLQDINFDREKKGEKSAVEKKETAARDESSCFF
LKLSNRLQELKARQEKLVQMQKQLQVEYTELMDRCLDSIEEVARTPVECELLFELLKNEA
TAAVLCYNLRLHPSIITSNLMDLAERGFVEYTIKNNQQYWRICETGVENK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggacccagcgaaattacttgacatcctggggaatgaaaaccgcaggaagataattcag
cttcttgcaaatcgcccctgctatgtcagtgagatttcaggcaggctgggggtaggacca
aaggcaattatcagtcatctgagcctgttagaacaggcaggactgatcgagttcagtgtg
gatgagcagaggcgcaagtacttcaatattgcaaataatatgaggcttgaggtgtcagta
tcaccctattcctatacgatgtctctccaggacattaattttgacagggagaaaaaaggg
gaaaaatctgctgtcgaaaaaaaagaaaccgctgccagagacgaatcttcctgcttcttc
ctgaaactgagcaacaggctccaggaacttaaagcaaggcaggagaaacttgtgcagatg
cagaaacagctacaggttgaatatacggagctgatggacagatgcctggactcgatcgaa
gaggttgccagaacccccgtagaatgcgagctcctgttcgagctcctgaaaaacgaggct
acagcggctgtcctctgctataacctgcgccttcaccctagtattataacatctaacctt
atggaccttgcagaaaggggctttgttgaatatacaattaaaaataaccagcagtactgg
agaatatgtgagaccggggttgaaaataaatga
DBGET
integrated database retrieval system
