Methanosarcina siciliae T4/M: MSSIT_3928
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Entry
MSSIT_3928 CDS
T03865
Name
(GenBank) Archaeal DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSSIT_3928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msw03032
]
MSSIT_3928
Enzymes [BR:
msw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSSIT_3928
DNA replication proteins [BR:
msw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSSIT_3928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
NUP120_helical
Motif
Other DBs
NCBI-ProteinID:
AKB30647
UniProt:
A0A0E3PBF7
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All DBs
Position
4957687..4959729
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AA seq
680 aa
AA seq
DB search
MNEIDIIRAVIEEGYQISPQAVELIKLSNSPENLLKYILSTIDDCVFVIEPEHVDLKSFE
ASTTFSRVTSGAPPGTVSGKVSGKISTPALDSASEPVSDSGYESSSEPSVEPDIVSAVEV
PDSNPEIEPEILSSQGSNSDFDSDPVYDSASDLVHDSVHDSVHDSVHDSVHDSVHDSVHD
TVSDPVNNSIHDSIHDSIHDTVHNFLPNPVSPSVSPKSIKKQASSFFGTTGPSSAFKNDL
RMNSLFSNQKNSFSSSSRDEGIRYIPGRNPVTVLSDITGHSTCVGEYMQFVQYFRDRYSR
LSEILRGRMNARPIESLKRRSFRRGSDGNTEELSIIGMVSDISTTTNGHKILSLEDSTGS
FSVLIRNSDKELFELASRLLLDEIVGVTGSVTNDGNLMLATKLLQPDVPNSVQRRTGSHG
KAVLISDVHVGSSQFLEDSWLDFLDFLKGESDSEEMREIAAQVRYLVVAGDLVDGIGIYP
DQEMELDIPDVYEQYRKAAEYIREVPEQIHVIISPGNHDAVRQAEPQPALPARICADFPE
NVTFVGNPALVDLDGVQILIYHGRSIDDLVASVPGVSYQEPAGAVLEMLKRRHLAPTYGS
RVSISPEKKDYFIIDPVPDIIHTGHVHTLGVQRYKNVLLVNSGTWQGQTEFQKRVNLMPM
PARVPVVDLANFDVKILAFD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatcgatattataagggcagttatagaggaagggtaccagataagcccgcaa
gccgtagaactaatcaaattaagtaactcccctgaaaaccttctaaaatacattctttca
actattgatgactgtgttttcgttatcgaacccgaacatgtcgacctgaagagctttgaa
gcttctacaactttttccagagtgacctctggagcacctcccgggacagtttccggtaag
gtttcaggtaaaatttccactcctgccttagattctgcttcagaacctgtctcagattct
ggctacgaatcttcctcagaaccttccgttgaaccggatatagtttcagcagttgaagtc
ccggactccaacccggaaattgaacctgaaattctttcttcccagggttcgaattcagat
tttgattctgatccggtttacgattctgcatctgatttagttcatgattcagttcatgat
tcagttcatgattcagttcatgattcagttcatgattcagttcatgattcagttcatgat
actgtttctgacccggttaataattcaattcatgattcaattcatgattcaattcatgat
actgttcataactttcttcccaatcctgttagcccctctgtttctccaaaaagtataaaa
aaacaggcttcctcttttttcggaactacaggtccttcttctgcctttaaaaatgattta
aggatgaattctcttttttcaaaccagaaaaattctttttcttcgagttccagggatgaa
gggatcagatatattccgggccgcaaccctgtcaccgtgctttccgacattaccgggcat
tcgacctgtgttggggagtatatgcagtttgtgcagtatttcagggacaggtatagcagg
ctctctgagatcctccggggaaggatgaatgcccggcctatagagagcctgaaaaggagg
agtttccgccgcggatccgacgggaacactgaggagttatcgatcatagggatggtttca
gatatcagcaccaccaccaatgggcacaagatcctttctcttgaagactcaacaggctct
ttttccgtgcttatccgaaatagtgataaagagctctttgaactggcttcgcggctcctt
ctggacgagattgtcggggtaacaggctcggttacgaacgacggaaaccttatgcttgcc
acaaaactcctccagcccgatgtccctaacagtgttcagcgcaggacaggaagccacgga
aaagccgtcctgatctcggatgtgcatgtgggtagttcccagttcctggaagattcctgg
ctggacttcctggactttttgaaaggagaatccgactccgaagaaatgcgggagattgca
gcccaggtccgttatctcgttgttgcaggagacctcgtggacggcatagggatttatcct
gaccaggaaatggaactggatatcccggatgtctatgaacagtacaggaaagccgcagag
tatataagagaagttcctgaacaaatccatgtgatcataagtcccggaaaccatgacgct
gtacgccaggcagaaccacagcccgccctgcctgcgcgaatctgtgcggattttcctgag
aacgtcaccttcgtaggcaaccctgctcttgtggaccttgacggcgtccagattcttata
tatcacggcagatcgattgatgatctggtggcgagtgttcccggggtatcatatcaggaa
cctgcaggggcagtccttgagatgctcaagcgcaggcaccttgctccgacttacgggagt
agggtttccatatccccggagaaaaaagactactttataattgaccctgttccggatatc
atccatacggggcacgtccatactctgggggttcagcgatacaaaaatgtcctgctggtc
aactccggaacatggcagggtcagaccgagttccagaagcgtgtaaacctgatgcctatg
ccggctagagtcccggttgtggatcttgcgaattttgacgtgaaaatcctggcatttgat
taa
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