Methanosarcina siciliae T4/M: MSSIT_3931
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Entry
MSSIT_3931 CDS
T03865
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
msw
Methanosarcina siciliae T4/M
Pathway
msw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSSIT_3931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msw03019
]
MSSIT_3931
03012 Translation factors [BR:
msw03012
]
MSSIT_3931
Messenger RNA biogenesis [BR:
msw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSSIT_3931
Translation factors [BR:
msw03012
]
Eukaryotic type
Release factors
MSSIT_3931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
Zn_ribbon_8
Zn_ribbon_LysW
Zn_ribbon_TFIIB
SLX1_C
Motif
Other DBs
NCBI-ProteinID:
AKB30650
UniProt:
A0A0E3P9I0
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All DBs
Position
4961656..4962903
Genome browser
AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLESLRDKKGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPDNGIVYFTGAIDIGANKTSMESEVIIPPEPITVYKY
HCDSSFYLEPLEDMLKDKSTFGLLVLDRREATVGLLVGKRIQAFRNLTSTVPGKQRKGGQ
SAHRFQQLRLIAIHDFYKRIGDAASEIFLAIDHKDLKGVLIGGPSPTKEEFYGGEFLHHE
LQKKILGLFDTAYTDESGLSELVNAAGEKLQDLELMGQKNAVRDFFKELIADSGKVAYGE
AQVRANLEINAVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGEPAPTAGNCPKCGS
SLEVTDVVDVVDEFSELADKSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYSTGI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatccgcacacgagaaatacgaatttaaaaagaagcttgaaagcctcagg
gataaaaaaggaaggagcacggagcttatttccctttatatccctgctgacaagcagatt
ttcgatgtcacaaaccagttaaaagacgagcacgggcaggctgcaaacataaagtccaag
cttacgaggacgaatgtgcagggagcaattgaatctctgctctcaaggctcagatacctg
gataaagtgcctgataacgggatagtgtactttacaggggctatagacatcggagccaac
aagacaagcatggaaagcgaagtaatcattccacccgaacccattactgtctacaagtac
cactgtgactcatctttctaccttgagcctcttgaggatatgctcaaggataagagcact
ttcgggcttcttgtccttgaccgcagagaagcgaccgtagggcttctggtcggaaaaaga
atacaggccttccgcaacctgacctcaacggtcccgggaaagcagagaaaaggtggtcag
agtgcccaccgtttccagcagctcaggctcatcgcaatccatgacttctataaaaggata
ggagatgccgcaagtgagatcttcctcgctatagaccataaagacctcaaaggcgttctg
ataggagggccttctccgacaaaggaagagttctacggaggagagttcctgcaccacgag
ctccagaaaaaaattctcgggctctttgatacggcatatactgacgaatccggactttcc
gagctcgttaatgctgcaggggaaaagcttcaggatcttgaactcatggggcagaagaat
gccgtcagagactttttcaaggaactgattgccgattcggggaaggtagcttacggagaa
gcccaggtcagggcaaacctcgagatcaatgcggtggatgtgcttctgctctccgaagat
cttcgggcagaaagggtaaccacgaaatgcagtgtctgcggatacgaaaataagtggaca
cggcgctggaagcccggagagcctgcccctacagccgggaactgccccaagtgcggttct
tcccttgaggttacggatgttgttgacgttgtggacgaattctcagagcttgccgacaag
agcaatgcaaaggtggtcttcgtgtccacagactttgacgagggttcccagctaatgaat
gctttcggaggcattgctgcaatcctgaggtacagtaccgggatctga
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