Marinobacter similis: AU14_01725
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Entry
AU14_01725 CDS
T03594
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
msx
Marinobacter similis
Pathway
msx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AU14_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msx03400
]
AU14_01725
Enzymes [BR:
msx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AU14_01725
DNA repair and recombination proteins [BR:
msx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AU14_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AHI27836
UniProt:
W5YFG5
LinkDB
All DBs
Position
complement(357742..358554)
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AA seq
270 aa
AA seq
DB search
MMFVSFNVNSIRTRLHQLEAVIASLNPDFIGLQETKVRDEEFPVEAIRELGYHVHFHGQK
THYGVALLSRIEPDEVIKGYSSDDEDSQRRLITGRFTVNGERLTVINGYFPQGESRDHPV
KFPAKEKFYADLMAFLDELKQQDGHVVVMGDMNISPTDKDIGIGADNAKRWLRTGKCSFL
PEEREWLGQVQARGYTDVFRHLHPDEADTFSWFDYRSKGFEREPRRGLRIDLIMASDSLL
PKATKAGVSYDIRGMERPSDHCPVWASIEL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgtgtcgtttaacgtcaacagtatccgcactcgcctgcaccagcttgaagcg
gtgatcgcgagcctgaaccccgactttatcggccttcaggagaccaaggttcgggacgag
gagtttcccgtggaggccatccgcgagctgggctaccacgtgcatttccatggccagaaa
acccattatggcgtggccctactgtcccggatcgagcctgacgaggtcatcaagggctat
tcgtcagacgatgaagactcccaacgacgcttaatcactggacgcttcactgtgaacggt
gagcgcctcaccgttataaacggctactttccccagggcgaaagccgggaccacccggtc
aagttcccggcgaaagagaagttctacgccgacctgatggcttttctggacgagcttaag
caacaagatggccacgttgtggtgatgggcgacatgaacatctcgccaacggacaaggac
attgggatcggcgctgacaacgccaagcgctggctcagaaccggcaagtgcagctttctg
cctgaagaacgggagtggctgggtcaagttcaggctcgcggctataccgatgtgttccgg
cacctgcatccggatgaggctgacaccttcagctggtttgattaccgcagcaaaggcttt
gagcgtgaaccccgacgggggctccgcatcgacctgatcatggccagtgatagcttgttg
cccaaggccacaaaggctggcgtatcctatgacatccgcggaatggaacgcccctcggat
cactgccccgtatgggcaagcatcgaactctag
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