Marinobacter similis: AU14_04240
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Entry
AU14_04240 CDS
T03594
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msx
Marinobacter similis
Brite
KEGG Orthology (KO) [BR:
msx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msx03016
]
AU14_04240 (truB)
Enzymes [BR:
msx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AU14_04240 (truB)
Transfer RNA biogenesis [BR:
msx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AU14_04240 (truB)
Prokaryotic type
AU14_04240 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHI28112
UniProt:
W5YFW9
LinkDB
All DBs
Position
886373..887302
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AA seq
309 aa
AA seq
DB search
MSRRRKGRDVNGILVIDKPQGVTSNGILQQVKRLYGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQMMLDSDKAYIATAKLGIRTETGDSEGAVVEEKPVPSELSATYLESVFDDFRGDI
QQVPSMYSALKHKGRPLYEYAREGIEIERPSRPVTIYELTLLDVREDELDIAVSCTKGTY
IRSLVEDIGEALGCGAHVSALRRTMASGFTLADAQEVPEMEAMRERDESLDGLLVAPDAA
LSMFPEVKLSGPSLVSILNGQPVRITGQSLEGFVRVYGNEGFVGLAEATPEGDGIKLVPR
RLVKTSDQR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgcagacgcaaaggtcgtgacgtaaacggaattctggtgattgataagccgcag
ggtgtcacctccaatggcatcctgcagcaggtgaaacgcctgtatggtgcggctaaggcc
ggccatactggcgcactggatcccttggccacgggcgtgttgccgttgtgctttggtgaa
gccaccaagttttcccagatgatgctggacagtgacaaggcctacatcgccactgccaag
ctgggcatccggactgaaaccggagacagcgaaggtgccgtggtcgaagagaagccagta
ccgtcagagctgtcagcaacgtacctggaatcggtgtttgacgattttcggggcgacatc
cagcaagttccctccatgtattccgccctcaagcacaaggggcgtcctctatacgaatac
gcccgcgaaggcattgagattgagcgcccctccaggccggtcactatttatgagctgacc
ttgctggacgtgcgtgaggacgagcttgatatcgccgttagttgcaccaagggtacgtac
attcgctcactcgttgaagacatcggtgaggctcttggctgtggtgcccatgtgtcggca
ttgcgccgcaccatggcttccggatttaccctggcggatgctcaggaagtcccggaaatg
gaggccatgcgcgagcgtgacgaaagcctggacggcctgctggtagcgccggatgccgcg
ctgtcgatgttccccgaggtgaagttgtcggggccgtcgctggtgtcgatattgaatgga
caaccggttagaataaccggccaatccctcgaagggttcgtgcgcgtttatggcaacgaa
ggcttcgtaggattggcagaagcaacaccggaaggtgatgggatcaagttggtcccgcgc
cgtttggtgaagaccagcgaccaacgctaa
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