Marinobacter similis: AU14_05380
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Entry
AU14_05380 CDS
T03594
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msx
Marinobacter similis
Brite
KEGG Orthology (KO) [BR:
msx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msx03016
]
AU14_05380
Enzymes [BR:
msx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AU14_05380
Transfer RNA biogenesis [BR:
msx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AU14_05380
Prokaryotic type
AU14_05380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AHI28254
UniProt:
W5YH78
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All DBs
Position
complement(1122429..1123406)
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AA seq
325 aa
AA seq
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MEFTFLGTSAGTPTRARNVTALALSPSGHKPWYLVDCGEGTQHQLLRAHHSVMQLRAIFI
THIHGDHTFGLPGLLTSASMLGRTEPLDLIAPVQTHRFITTTLENSDSSLSYPLNFIDSE
APGFHWQDDHAEVTNVALSHRVPCRAFVFTERNLERQLLQDKLRDYGIEPGPSWGELQKG
HDVTLPDGRLLRSDDYTQIPRVARRLIVAGDNDDPTLLADASVGSHLLIHEATYTQDVSE
RVGPWPQHSSAEQVAKFAQQAQLPNLVLTHFSSRYQSGPHGTPNINQLAAEALQHYQGKL
FLARDFDTYRLEKDLSLTCLSAENS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaattcacttttctgggcacctccgccggcacaccaacacgagcacgcaacgtcacc
gccctggcgctgtcgccatccggccacaagccctggtacctggtggactgcggtgaaggt
acccaacaccagctgctgcgcgctcaccactcggtgatgcaattgcgggcgatcttcatt
acccacatccacggcgaccacacctttggcctaccgggactgctcaccagtgcctccatg
ctgggccgcaccgagccgctggatctcatcgccccggtgcagactcatcgctttatcacc
accacgctcgaaaacagcgactccagcctgagctaccccctgaacttcatcgattccgag
gccccaggctttcactggcaagatgaccacgctgaggtgaccaatgtggcgctgtcccac
agggtgccttgccgcgcctttgtgtttacggagcggaatctggagcgacaactgctgcag
gacaaactgcgggattacggtattgagccaggcccaagctggggcgagctgcagaaaggc
cacgacgttaccctgcctgatggccgcctactgagaagtgacgattacactcaaataccc
cgggtggctcgccgtctgatcgtcgccggcgacaacgacgaccctaccctgctggccgac
gccagtgttggcagtcacctgctgattcacgaggccacctacacccaggacgtatccgag
cgagtcggcccctggccacagcacagctccgccgaacaagtggccaagtttgcccagcag
gcccagctgcccaatctggtgctgacccatttcagctcccgctaccagtccgggccgcac
ggtacacccaacatcaaccaactggccgctgaagccctgcagcattatcagggcaaactg
tttctggctcgggatttcgacacttaccggctggagaaggacttgtcactgacctgcctg
agcgcagagaattcctga
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