Marinobacter similis: AU14_06705
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Entry
AU14_06705 CDS
T03594
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
msx
Marinobacter similis
Brite
KEGG Orthology (KO) [BR:
msx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msx03016
]
AU14_06705 (trmE)
Transfer RNA biogenesis [BR:
msx03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AU14_06705 (trmE)
Prokaryotic type
Methyltransferases
AU14_06705 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
AIG1
RsgA_GTPase
Roc
GTP_EFTU
ABC_tran
AAA_16
AAA_28
Arf
AAA_29
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AHI28419
UniProt:
W5YHU5
LinkDB
All DBs
Position
complement(1374911..1376242)
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AA seq
443 aa
AA seq
DB search
MSQTADTIAAIATAPGQAGVGIVRVSGPAAADIARQMLGFIPKPRYAHYGPFLDQNGGLI
DEGIGLFFPNPHSFTGEDVFELQGHGGTVILDLLLREVCSRGARLARPGEFSERAFLNDK
LDLAQAEAIADLIESSSEQAARCAVRSMQGVFSRRVDDLVDAVTHLRIYVEAAIDFPEEE
IDFLADGKVAGDLQQLLERLETILGEAQQGTILRDGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTAIEGTTRDVLREHIHIDGMPLHIIDTAGLRDSPDEVEQIGIARAWDEISQADRIL
LMVDATTTEQTEPHEIWPDFIDRLPANAPVTVVRNKVDLSSEAVGFTDTDSGTAPVIRLA
AKSSDGLEVLRDHLKQCMGFASTTEGGFLARRRHLDALERARANLLQGQGQLEGISRATK
TSLAGHHQNMPKAPLVGIGRPPG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacagcagacacaattgccgccattgccactgcccccggccaggccggtgtg
ggaattgtccgtgtgtcggggccggctgccgcggacattgcccgccagatgctgggtttt
atccccaagccacggtacgcccattacggccccttcctggaccagaatggcggcctgatc
gatgaaggtatcgggttgttcttccccaacccgcattcgttcactggtgaagatgtgttt
gaactccagggccatggcggcacggttatcctcgatctgctgctgcgggaagtttgtagc
cgcggcgcccgattggcgcgaccgggggagttttccgagcgggcatttctgaatgacaag
ctggatctggcccaggccgaagccatcgccgatctcatcgaaagcagttcggagcaggcc
gcccgctgtgccgtgcgctccatgcagggggtgttctcccgccgtgtcgacgatctggtg
gatgcggtaacccacctgcgcatctacgtcgaagcggccatcgattttcccgaggaagaa
atcgatttcctggctgacggcaaggttgccggcgatctgcagcagctgctcgaacggttg
gagaccattctcggcgaggctcagcaaggcaccattttgcgggatggcatgaaggtggtg
atcgccggccgccccaacgccggcaagtcgagcctgctcaacgccctcgccgggcgcgag
gcggccattgttaccgccattgaaggcaccacccgggacgtgctccgggaacatatccac
atcgatggcatgccgctgcacatcatcgacaccgctggcctgcgagacagcccggacgag
gtcgaacagatcggtattgcccgggcctgggatgaaatttcccaggccgaccggatcctg
ctgatggtggacgccaccaccaccgagcagaccgaaccccacgagatctggccggatttt
atcgaccgcttaccggccaatgccccggttaccgtggtgcggaacaaggtggatctgtcc
tcggaagccgtgggcttcaccgataccgacagcggtactgcgccggtgatccggctggcg
gcgaaatcctccgacggcctggaagtgctgcgggatcacctcaagcaatgcatgggcttt
gccagcactaccgaaggcggcttcctggcccggcgccggcacctggatgctctggagcgg
gcgcgcgcaaacctgttgcagggccagggccagctggagggcatcagccgcgccaccaaa
acctcgctcgccggccaccaccagaacatgcccaaagcgccccttgtgggcattggccgg
ccgcctgggtaa
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