Marinobacter similis: AU14_13220
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Entry
AU14_13220 CDS
T03594
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
msx
Marinobacter similis
Pathway
msx02020
Two-component system
msx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AU14_13220
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AU14_13220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msx03021
]
AU14_13220
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
msx02035
]
AU14_13220
Transcription machinery [BR:
msx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AU14_13220
Bacterial motility proteins [BR:
msx02035
]
Flagellar system
Flagellar assembly proteins
Stator
AU14_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
MarR
GerE
Motif
Other DBs
NCBI-ProteinID:
AHI29203
UniProt:
W5YRT8
LinkDB
All DBs
Position
2766835..2767575
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AA seq
246 aa
AA seq
DB search
MTNNLGIYQQAGASGQARLIEEQAPLVKKIALHLMARLPASVQLEDLIQAGMIGLLEAAQ
RYSSAKGATFETYAGIRIRGAMVDEIRKGDWVPRSVHRNARRISQAIKAVEDREGREAQD
LEVAEELGMELSEYHASLSDANSGRLFSLDELNESGELPIEEAETSDNPLDGLASDSFRR
NLAHAIEELPEREKLVLSLYYQEELNLKEIGAVLGVSESRVSQIHSQAALRLRGRLSDWQ
RDASEQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaataacctgggaatctaccagcaggccggcgcttcgggtcaggcccgtctcatt
gaagagcaggccccgctggtcaagaaaatagcgctgcacctgatggcccgactaccggcc
tcggtgcagttggaagaccttatacaagccggcatgattggcctgcttgaggctgcccaa
cgctatagttccgcaaaaggcgctaccttcgaaacctatgccggtatccgcatccgcggc
gccatggtggatgaaatccgcaagggcgactgggtgccccgatccgttcaccgcaatgcc
cgccgtatctctcaagcgatcaaggccgtggaagaccgcgaaggccgggaagcgcaggac
ctggaagttgctgaagagctgggaatggagctgtcggaatatcacgcctcgctatcggac
gcgaacagcggacgactttttagccttgatgagctcaatgaatcgggagagctgccgata
gaagaagcagagaccagtgataatccactggatggcctcgcttccgactcgtttcgacgc
aacctggcacacgccattgaggagttaccggagcgcgagaagctggttctgagcctgtat
taccaggaagagctgaacctgaaagagatcggcgccgtgctcggggtaagcgaaagcagg
gtcagtcagattcacagccaggccgcactgcgattgcgcggtcggctgtccgactggcag
cgggacgccagcgagcaatga
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integrated database retrieval system
