Marinobacter similis: AU14_13500
Help
Entry
AU14_13500 CDS
T03594
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msx
Marinobacter similis
Pathway
msx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AU14_13500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msx03021
]
AU14_13500
03400 DNA repair and recombination proteins [BR:
msx03400
]
AU14_13500
Enzymes [BR:
msx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AU14_13500
Transcription machinery [BR:
msx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AU14_13500
DNA repair and recombination proteins [BR:
msx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AU14_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF22
Motif
Other DBs
NCBI-ProteinID:
AHI29242
UniProt:
W5YJ39
LinkDB
All DBs
Position
2804333..2805337
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVHELLTPRTIDVKESSATRAKVTLEPLERGFGHTLGSALRRILLSSMPGCAVTEAQ
IDGVLHEYSAIEGVQEDVIEILLNLKGVAVKMNGRDDAELTLSKKGPGVVTAGDIKLDHD
VEIANPEHVICHLSENGEVNMRLRVNRGRGYEPADQRGLDEDETRAIGRLQLDATFSPVR
RVAYSVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPE
RVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLRGDDRVLGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtacatgagttattgacacctcgtaccattgacgtgaaagaatccagc
gccacgcgtgccaaagtgacgctcgagcctctggaaagaggctttgggcacactttgggc
agcgcgctgcgccgtattctcttgtcctcgatgccgggctgcgctgtaactgaagcgcag
atcgatggcgtcttgcacgagtacagcgccattgagggtgtccaggaagacgtcatcgag
attcttctgaatctcaagggcgtcgccgtgaaaatgaacggccgggacgatgccgagcta
acgctcagcaaaaaaggcccgggcgttgtcaccgccggtgatatcaagctcgaccatgat
gttgagatcgccaacccggagcacgtgatctgtcacctgagcgaaaatggtgaagtgaac
atgcgtctccgtgttaaccgcggtcgcggctatgagccggcagaccagcgtggtctcgac
gaggacgaaactcgcgccattggacgcctgcagctggatgcaactttcagcccggttcgt
cgtgtggcttactccgtggaaagtgcacgggtagagcagcggactgacctggacaagctg
gtgattgatctggagaccaatgggacgattgatccggaagaagcaattcgccgggccgcg
accatcctccagcagcaattggcggtgtttgttgatttcgatcatgagaaagagccagag
cgcgtagaggaagaggaagaaatcgatccgatcctgttgcgcccggttgatgatctggaa
ttgacagtgcgttcagctaactgcttgaaggctgagaatatttactacatcggcgatctg
atccagcgcactgaagttgagctgttgaagacgcctaaccttggtaaaaagtcgctgacc
gagatcaaggacgttttggcgtctcgtggtctgtctttgggcatgcgtcttgataactgg
ccgccggctagccttcgtggcgacgaccgggtgttgggcggttaa
DBGET
integrated database retrieval system
