Marinobacter similis: AU14_17140
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Entry
AU14_17140 CDS
T03594
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
msx
Marinobacter similis
Brite
KEGG Orthology (KO) [BR:
msx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msx03016
]
AU14_17140
Enzymes [BR:
msx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AU14_17140
Transfer RNA biogenesis [BR:
msx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AU14_17140
Prokaryotic type
AU14_17140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF826
Motif
Other DBs
NCBI-ProteinID:
AHI29679
UniProt:
W5YLB1
LinkDB
All DBs
Position
complement(3593644..3594744)
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AA seq
366 aa
AA seq
DB search
MNNNHESTSRWRLDWPTSAGGRIARGQLKSCPEDFQVDEDLQGVPAEASPEDIAGDGEHL
YLRLRKTGDNTEFVARELASLAGCRSFDVGFCGLKDRHAVTSQWFSLYRPGKASEDSEFI
ASVAERWQVLSAFRSSRKLRRGDHQGNHFVIVLRDVVGTHADIDEALARLKEQGAPNYFG
PQRFGHGGGNLDQAAAMDPSAMDSRSRSGGRGRKGKNRAGREASKNVLYFSAARSWLFNE
VLAHRVSEGSWLTAMDGEPGFSEADSVPTGPLWGDGGTVAEGVQGELERQVVEQAPDLVR
VFSTTRMKPERRALAVLPGELVWHWQDDGSLRLEFSLAPGQYATTLLNDVFELEDMSLGR
HNKQQG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgaataacaaccacgaatccacgagtcgctggcgtctggactggccgacttcggccggt
ggccgaatcgcccggggtcagttgaaatcctgccctgaagacttccaggtggatgaggat
ctgcagggagtgcccgcagaggcgtcgcccgaagacatcgccggggacggtgagcatctg
tatctgcggcttcgcaaaaccggcgacaacactgagttcgttgcgcgggaactggcctcg
cttgccggctgtcggtcgtttgatgttggcttttgtggcctgaaggaccgtcacgctgtc
accagccagtggttcagcctctatcgcccgggcaaggcatcagaagattccgagtttatt
gcaagcgtggccgagcgctggcaggtgctgtcggcatttcgctccagccgaaagctgcgt
cgcggtgatcatcagggcaaccactttgtcatcgtactgcgggacgtggtgggaacacac
gccgatattgatgaggccctcgcccggctgaaggagcagggggcaccaaattattttggt
ccccagcgctttggtcatggtggtggtaatctggaccaggccgcggccatggatccgtcc
gccatggacagccggtcccgttctggtggacgcggtcgcaaaggcaaaaaccgcgctggc
agagaggcctcgaaaaacgtattgtacttttcggcggcacgttcgtggctgttcaatgag
gtgcttgcccaccgggtatctgaggggagctggctcacggcaatggacggtgagcctggt
ttttctgaggctgactcggtaccaacaggaccgctgtggggtgatggcggaactgttgcc
gaaggggtgcagggcgagttggagcgccaggtggtcgagcaggcgccggatcttgtccgg
gtattctcaaccacccgcatgaaacctgagcggcgtgccctggcagttttgcccggtgag
ctggtgtggcactggcaggatgacggcagtctccggcttgagttctcactggcacccggc
cagtacgccaccaccctgctgaatgatgtattcgagcttgaggatatgagcctcggccgc
cataacaaacaacaaggctag
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