Mycoplasmopsis synoviae 53: MS53_0647
Help
Entry
MS53_0647 CDS
T00261
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
msy
Mycoplasmopsis synoviae 53
Pathway
msy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MS53_0647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msy03019
]
MS53_0647
Messenger RNA biogenesis [BR:
msy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MS53_0647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Motif
Other DBs
NCBI-ProteinID:
AAZ44054
LNCC_Brazil:
MS0647
UniProt:
Q4A5B7
LinkDB
All DBs
Position
complement(751226..752899)
Genome browser
AA seq
557 aa
AA seq
DB search
MAHINLFALGGQDENGKNCYVLEHQADIFIINVGVKIPINSTNGVDALIPNFEYLTQRKN
RIQGVFITNVKNDNFSAIPWLVMKIPNLKIYTSSYNKTIVINRLNKYNISPSQYKVIAFD
KDLEFKNLKIQAIPVSGSIPGNLAFLFKLEFGSFLFMFNYVEGDLKYFGNLNYKNLLAKL
DNKPLVGLITNSGQSNYPATAMSRLNLPDYIENVFKESIDSNYQIVVGSYDEEMVNLDQI
INLCKKYNKKIVIYGRTYANLLNLLSKTNLEFGSSLPEILDHKTIKKHKDCVILFTGKLT
RLYKRFQRVLDNEDAYLKLKSDHRVIMMAPPINGTESLYASLLDQIAKVTPYIWDVSDLE
LFRSNPTKEDLSNLLFALRPKYFLPVAGLYRYLIDSSNYLKDSAKQNKFNFDSLVLQNGA
IARFEDDKLINSNAKIKEVGETIIDGFGVGDISSEIVSERETLGREGAIIINVLYSSKPN
KPKMILDEIQIDFTGVTSEENFDDIKKLIKATIVKIISKEKFKSIKELNKRLRKSVRKKI
FKTTDKDSVVALSFISV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcacatattaatttatttgctttaggtggacaagacgaaaacggaaaaaattgttac
gttcttgaacaccaagctgatatttttataattaatgttggtgttaaaattccaatcaac
tctacaaatggagttgatgcgcttattcctaactttgaatatctaacacaaagaaaaaat
agaattcaaggtgtttttattacaaatgttaaaaatgacaatttttctgccataccttga
cttgtaatgaagattcctaacttaaaaatttatacctcttcatataataaaacgatagtt
atcaatcgtttaaataaatacaatataagtcctagtcaatacaaagttatcgcctttgac
aaagacttagaatttaaaaatttaaaaattcaagccattccagtttcaggatctattcct
ggtaatttagcctttttattcaaattagaatttggaagctttttatttatgtttaattac
gtagaaggtgatttaaaatactttggtaatttaaactacaaaaatcttttagctaaatta
gataacaagcctttagtagggctaattacaaactccgggcaaagcaattatccagctact
gctatgtcgcggctaaatcttcctgattacattgaaaatgttttcaaagaatcaattgat
tcaaactatcaaatcgtagttggttcatacgatgaagaaatggttaatttagaccaaata
attaacctttgcaaaaagtacaataaaaaaattgtaatctacggaagaacgtatgctaac
ttgcttaaccttttatctaaaaccaatttagaatttggaagctctcttcctgaaatttta
gatcacaaaactattaaaaaacacaaagactgcgttattttatttactgggaagttaact
aggctatataaaaggttccaaagagttttagataatgaagatgcttatctaaaactaaaa
agtgatcatagagtaattatgatggctccgccaattaatggaactgagtcattatatgca
tcgcttctggatcaaattgcaaaagttactccatatatttgagatgtatctgatttagag
ctttttagatccaatcctacaaaagaagatttatcaaatcttctatttgcgctgcgccca
aaatatttcctaccagtagcaggtctatatcgttatttaattgactcaagtaactattta
aaagactcagcaaaacaaaataaatttaattttgactcgctagttcttcaaaacggagca
attgctcgttttgaagatgacaaattaattaatagtaatgctaaaattaaggaagtaggc
gaaactattattgatggttttggtgttggtgatatatcaagcgaaatagtatctgaaaga
gaaactcttggtagagaaggcgcaattattattaacgttttatattcatctaaacctaat
aaaccaaaaatgattcttgatgaaattcaaatcgactttactggagtaaccagcgaagaa
aactttgatgatattaaaaagctcatcaaagctacaatcgtaaaaataatttctaaagaa
aaatttaaatcaattaaagaattaaacaaacgtcttagaaaaagcgttagaaaaaaaatc
tttaaaaccactgataaagattcggtagttgctctaagttttataagcgtataa
DBGET
integrated database retrieval system
