Malus sylvestris (European crab apple): 126581887
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Entry
126581887 CDS
T09027
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126581887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126581887
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
126581887
Prokaryotic type
Archaeal type
TFB
126581887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
126581887
NCBI-ProteinID:
XP_050101774
LinkDB
All DBs
Position
9:complement(4479901..4484830)
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AA seq
318 aa
AA seq
DB search
MEAKEFCRDCKQETDVVSDHRSGDTICTFCGLILEARYIDERAEWRNFADQNPEEDRTRV
GKASDPLLDNGVLSTCIFKEKKKNNKKGTDADGNFPPNKWTNRAVNPSNSLLKSFKYLEE
MADRLDIYEGVPKCILDHAKGLYKKADDKNFCKGRNSNPIMAACLLLAFEESPNTRTLKE
ITMVANGPSKKEISKMKEELKRSLGIASKIKSAMDLWPRHCSNLGMSSKDKKAVEGALKN
LANFDIRRNPNSVVAAVMYMVVQLSNGNNCSVQDVSKAADGVAVGTTKRTYKDIYPYASQ
IIPTWFCRLEDLKKLITP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaaagagttctgtagggactgcaagcaagagacagacgtcgtgtccgaccac
aggtcgggtgacacaatctgcaccttctgtggtttgatcctcgaagcccgctacatcgat
gaaagagccgagtggcgaaattttgccgatcagaaccctgaagaagaccggactcgcgtc
ggaaaagcctccgatccgttgctggataatggtgttctttccacttgtatattcaaagaa
aagaagaaaaacaacaagaagggtactgatgccgatggtaattttcctcctaataaatgg
accaacagggctgtaaaccctagcaattctctcctaaaatctttcaagtacctcgaagag
atggccgaccggctagacatatacgaaggcgttccgaaatgcatactggatcatgccaaa
ggtttatacaagaaggccgatgataagaacttctgtaaggggagaaattctaaccccata
atggctgcttgcctcttgcttgcgtttgaagaaagcccaaatacgcgaacactaaaggaa
atcaccatggttgccaatgggccatctaaaaaagaaatcagcaagatgaaagaagagttg
aagagaagcctagggattgcttccaagatcaaaagcgccatggacctttggccgcgacat
tgttcgaatcttggtatgagtagtaaagataagaaggctgtggaaggagccctgaagaat
ttggcaaattttgatattaggagaaaccctaattctgttgtggcagcggttatgtacatg
gtagttcagctttctaatgggaataactgttctgttcaagatgtctcaaaggcagctgat
ggtgttgctgtagggacaactaaaaggacatacaaggatatttatccctatgcttcacag
ataataccaacctggttttgcaggttggaggacctcaagaaacttatcactccttga
DBGET
integrated database retrieval system
