Malus sylvestris (European crab apple): 126581891
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Entry
126581891 CDS
T09027
Name
(RefSeq) homeobox-leucine zipper protein HDG11-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126581891
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
126581891
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
VPS53_C
CHP02642
Motif
Other DBs
NCBI-GeneID:
126581891
NCBI-ProteinID:
XP_050101777
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All DBs
Position
9:33139255..33149285
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AA seq
696 aa
AA seq
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MELSGNGGASSDEASNSRRGNKKYHRHTNEQIQRLEELFKHCAHPDDSQRQQLGRELGLE
PKQIKFWFQNKRTQTKAQSERADNTILRQDNERIQCENYAMREALKNVSCPTCGGPPFGE
EERQINLQSLQLENAYLKEEHDKVASLLSKYIGKPLSQIESLASVVGSTLDLSPGCSINQ
GIIGSPPLDLNLTSPTFSYQLQEIPEMEKTLMADIAASALEELVKLFQIDEPLWVKSTAY
GRYFLNRGNYDKIFPRTNQFKTSSARIESSKDSGVVTISAATLVDMFLDSNKWEELFPTI
VTKAKTIEVLESGMIGNRSGCLLLMYEQMHILSPLVLPRDFYFLRYCQQIELGTWVVVDV
SHKFPKESSSNQSRSWRLPSGCLIKDMTNGCSKVTWIEHVEVDDKTQTHRLYRDLICSSV
AYGAERWIITLKRMCERFDCLMDEVESTCEFGGVVSSPEGKRSVMKLSQRMVKNFCGMLS
MAGKLDFPQLSEVNNSGVRVSVRKSAESGQPHGMIVSVATSLWLPLPSETVYNFFRDEKN
RVQWDVLSNGNPVHEIANISTGTHPGNCISVIRPFIPTENNMLMLQESYTDPLGSLFVYA
PVDVPALNVAVSGEDSSNIPILPSGFVISGDGRAEVTGDSGHSTAGGSLLTVAFQILVSS
PSTSKQMNMESVATVNTLISSTVQKIKVALNCSSLD
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggagctttcgggaaatggtggagcttcaagtgatgaagcatcgaattcccgcagaggc
aacaaaaaatatcatcgccatactaatgagcagatacaacgactcgaagaacttttcaag
cactgtgcccacccggatgacagccaacgtcaacagctgggcagggaattgggccttgaa
ccaaaacaaatcaagttctggtttcagaacaaaagaacacagaccaaggctcaaagtgag
agagcagacaacactattcttcgtcaagataatgaaaggattcaatgtgaaaactatgcg
atgagagaggccttaaagaatgtcagttgcccaacctgtggtggtccaccgtttggagaa
gaagagcggcagatcaatctgcagagccttcagctggagaatgcctatttgaaagaagag
catgataaggtagccagccttctttccaaatatattgggaaaccactatcacaaattgaa
tcgcttgcgtctgtagttggatccacactggatttatcaccaggatgttcgatcaaccaa
gggattattggcagtccaccccttgatctcaatcttactagtcctacattttcttaccaa
ttacaagaaatccctgaaatggaaaagacactcatggcagacattgctgccagtgccttg
gaagaactggtcaaactttttcagatcgatgagcccttatgggtgaaatccacagcttat
ggacgatatttcctcaaccgtggcaactatgataagatatttcctagaaccaatcaattc
aaaacctctagtgcgcgtatcgaatcttcaaaagattcaggagtagtgaccattagtgca
gcaaccttggttgacatgttcttagactcaaataaatgggaagaactctttcccacaatc
gttacaaaagccaagacaattgaagtacttgaaagtggaatgataggaaatcggagtggt
tgcctactgctgatgtatgaacaaatgcacattctctcacctttggtgctgccacgggat
ttctactttcttcgttattgtcagcagattgagctaggcacatgggtcgttgttgatgtt
tcccacaaattccccaaagagagttcttcaaatcaatcacgatcttggcggcttccttcg
ggttgtttgatcaaagatatgactaatggatgctccaaggtaacttggattgagcatgtg
gaggttgatgacaagacacaaactcatcggctctacagagatcttatatgtagtagtgtt
gcatatggagcagagagatggatcattactcttaagaggatgtgtgagagattcgattgc
ttgatggatgaagttgaatctacttgtgaatttggaggagtggtaagttcgcctgaaggc
aagaggagtgtaatgaagctctctcagagaatggtgaagaacttttgtggaatgctgagc
atggcaggtaaacttgacttccctcagttgtccgaggtgaacaacagtggggttcgagtc
tctgttcgtaagagtgcagaatcaggacagccccatggcatgatcgtcagtgttgctact
tctctttggcttcctctaccctccgaaactgtctataacttcttcagagatgagaaaaat
agagttcagtgggatgttctgtctaatggaaatccagtgcatgagattgcaaacatttca
actggaacgcatccaggaaactgtatatctgtcattcggcctttcatccccaccgagaat
aacatgctgatgcttcaagagagttacacagaccctttgggatccttgttcgtatatgct
ccagtcgatgtaccagctcttaacgtagcagtaagcggcgaggactcttccaacatacct
atcctcccatcggggtttgtgatatcaggcgatggccgtgctgaagtaactggggattca
ggccattccacggcaggtggttcacttctcacagtggctttccagatattggtttccagc
ccgtcaacttcaaagcagatgaacatggagtcagtggcaactgtcaacactctcatcagt
tccaccgttcaaaaaatcaaagttgctctcaactgctcgagcttggattaa
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