Malus sylvestris (European crab apple): 126581909
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Entry
126581909 CDS
T09027
Name
(RefSeq) eukaryotic initiation factor 4A-8
KO
K03257
translation initiation factor 4A
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126581909
03012 Translation factors [BR:
msyl03012
]
126581909
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126581909
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126581909
mRNA cycle factors
Stress granule specific factors
126581909
Translation factors [BR:
msyl03012
]
Eukaryotic type
Initiation factors
eIF-4
126581909
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126581909
Exosomal proteins of bladder cancer cells
126581909
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF8050
Motif
Other DBs
NCBI-GeneID:
126581909
NCBI-ProteinID:
XP_050101805
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Position
9:16331199..16334788
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AA seq
413 aa
AA seq
DB search
MAGVAPEGSQFDAKQYDTKMSELLSTDGQDFFTSYDEVFESFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGVVQCQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTKDDERMLYDIQRFYNVVIEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgttgcacccgagggatcacaatttgatgcaaaacagtatgatactaagatg
agtgagctgctctcaactgatgggcaagatttcttcacatcgtatgatgaagtttttgaa
agttttgatgccatgggattgcaggaaaatctgctgagaggcatttatgcttatggtttt
gagaagccttctgcaattcagcaaaggggaattgttccattctgcaaaggccttgatgtg
attcaacaggctcagtctggaaccgggaaaacagcaaccttttgctcagggattttgcag
caacttgattatggtgttgtccagtgccaggccttggttttggctcctaccagggagttg
gcacagcagattgagaaggttatgcgagcacttggtgactaccttggcgttaaggttcat
gcttgtgttggtgggacaagtgttcgtgaggatcagcgcattcttcaagctggtgttcat
gttgttgttggaacccctggtcgtgtgtttgacatgttgaggaggcagtcgcttcgccca
gattacattaagatgtttgtattggatgaggctgatgaaatgctttctcgtggttttaag
gatcagatctacgacattttccagcttttgccatcaaaggttcaggttggggtgttctct
gctaccatgccacctgaagcccttgaaatcactagaaagtttatgaacaaacctgtgagg
attttggtaaagcgtgatgagctcacccttgagggtatcaagcagttctatgtcaatgtc
gataaagaagaatggaagctcgagaccctttgtgatttgtatgagactctggccatcacc
cagagtgtcatttttgttaacaccaggcgcaaggtggactggcttaccgacaagatgaga
agccgtgaccacactgtctctgccacccatggtgacatggaccagaacactcgtgatatc
atcatgcgtgaattccgatcaggctcatcccgtgttctcatcaccactgatctcttggct
cgtggtattgatgtgcagcaggtatctctcgtaatcaactatgatttgccgactcaacct
gaaaactaccttcatcgtattggacgaagtggtagatttggaaggaagggtgttgctatt
aactttgtgacaaaagacgacgagagaatgctctatgacatccagaggttttacaacgtg
gtgattgaggagctcccatcgaatgtggccgatcttctctga
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