Malus sylvestris (European crab apple): 126581940
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Entry
126581940 CDS
T09027
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00061
Fatty acid biosynthesis
msyl00071
Fatty acid degradation
msyl01100
Metabolic pathways
msyl01212
Fatty acid metabolism
msyl04146
Peroxisome
Module
msyl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
126581940
00071 Fatty acid degradation
126581940
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
126581940
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msyl01004
]
126581940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126581940
Enzymes [BR:
msyl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
126581940
Lipid biosynthesis proteins [BR:
msyl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
126581940
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of breast milk
126581940
Exosomal proteins of breast cancer cells
126581940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
126581940
NCBI-ProteinID:
XP_050101845
LinkDB
All DBs
Position
9:complement(34214791..34224330)
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AA seq
662 aa
AA seq
DB search
MKIFSVAVEEGREGKDGKPSLGPVYRNLLAQNDFPPLDRQINSSWDLFSLSVQKHPGNRM
LGWRKMVDGKPGPYTWKTYKEVYDEVLDVGSALRLSGVEPGSRVGIYGANCPQWIMAMEA
CNAHSLICVPLYDTLGPRAVNFIIDHAELDVVFVQDKKVKELLKPDSTSSKRIKVMVCFS
SMTDEEKNKSVQIGIKPYSWNEFTEMGKQNPSEIVPPTTDNIAGIMYTSGTSGDPKGVVI
THENVAYGVRGIDLFMEQFEDKMTGDDVYLSFLPLAHILDRVIEEYFFRNGAAVGYYHGD
LNALRDDMVELKPTLLAGVPRVFEKIHEGIKKAVLELNPRRRKIFDILYKYKLAWMNRGY
KNKYASPIADLLAFRKVKARLGGQLRLIISGGAPLSSEIEEFLRVTCCAFVVTGYGLTET
IGPTTLGFPDEMCMVGAVGTVSVYNEMRLEEVPEMGYNPLGDHPCGEICVRGKTVFAGYY
KNPELTREAIKDGWFHTGDIGEILPNGVIKVIDRKKNLIKLSQGEYVALEYLENVYGVAS
IIEDIWVYGNSFKSMIVAVVVPEEETAKKWAYLNGHMGSFSDLCSLDQLKDHIMAELKLI
AERNKLSGFQYIKGIIIEPRPFDMERDLVTATLKKKRNHLLKYYQVQIDQLYNTLDGRKF
SN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttctcagttgcagtggaggaaggaagagaaggcaaggatggcaagccttca
ctcggtccagtgtaccgtaatttactcgcccaaaatgattttcctccgcttgatcgccaa
attaattcatcttgggacctctttagtctatctgtccagaagcatcctggaaatcgaatg
cttggatggcgtaaaatggttgatgggaagccagggccttacacttggaaaacatacaag
gaggtttatgacgaagttctggatgttggttctgcattgcgattatccggtgttgaacct
ggttcccgggttgggatttatggtgcaaattgtcctcagtggattatggcaatggaggct
tgtaatgctcacagtttgatttgcgtgcctctctacgatacccttggtccaagagctgta
aactttattatagatcacgcagagcttgacgttgtttttgtccaagataagaaagtgaaa
gaactactgaaacctgattctacatcttctaaacgaataaaagttatggtctgcttcagt
tcaatgacggatgaagagaagaacaaatcagtgcagattgggataaaaccgtactcatgg
aatgagttcacggagatgggtaaacaaaatccgtcggagattgttccaccaacgacagat
aatattgctggcattatgtacacaagcggcaccagcggagatcctaaaggagttgtgata
acacatgaaaatgttgcatatggagtgagagggattgatctctttatggaacaatttgaa
gacaagatgacaggggatgatgtctatctatctttccttcccttggctcatatcctcgac
cgcgtgattgaggagtattttttccgcaatggtgctgctgttggctattatcatggggat
cttaatgcactgagggatgacatggtggagttaaagccaacgcttcttgctggggtacct
cgagtttttgaaaaaatacatgaaggtataaagaaagcagtgctagagcttaatccaaga
agaaggaagatttttgacattctctacaaatacaaacttgcttggatgaatagggggtat
aaaaacaaatacgcatcgcccatagcggatctgttggccttcagaaaggtcaaagctagg
ttaggtggtcaacttcgacttataatatctggaggtgcacccttgagctctgagatcgaa
gaattcttgcgagttacctgctgcgcattcgtagtcacaggctatgggttgacagaaact
atcggaccgacaactctcggctttcctgacgaaatgtgcatggttggtgctgttggcacc
gtatctgtatacaatgagatgcgcctggaggaggttccggaaatgggctacaatccactt
ggggatcatccgtgtggtgagatatgtgtgagagggaagactgtttttgctggctactac
aaaaatcctgaattaacaagagaggccatcaaagatggctggttccacacaggtgacata
ggggaaatacttccgaacggagtcatcaaggttatcgataggaagaagaatcttatcaaa
ctctcacaaggagagtatgttgcacttgagtacttggaaaatgtttatggcgttgcttct
attattgaagatatttgggtctacggaaacagcttcaagtcgatgattgttgcagtggtg
gtaccggaagaagagaccgccaagaagtgggcttatttgaacggtcacatgggttccttt
tcggatctttgttctcttgatcagctaaaagatcacattatggctgagcttaagttaata
gctgagaggaacaagctgagtggctttcaatacatcaagggaatcatcatagaacctcgg
cccttcgacatggaaagagacttggtgactgcaacattgaagaagaaacgaaatcacttg
ctcaagtattaccaggttcaaattgatcaactctacaataccctggatggaagaaaattt
agtaattaa
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